RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 LONRF1Q17RB8 773 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 ZNF568Q3ZCX4 644 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 LACTB2Q53H82 288 aaPredicted RBP15.29■□□□□ 0.04
USP44-203ENST00000537435 LMBRD2Q68DH5 695 aaPredicted RBP15.29■□□□□ 0.04
USP44-203ENST00000537435 RDM1Q8NG50 284 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 HERPUD2Q9BSE4 406 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 ROPN1BQ9BZX4 212 aaPredicted RBP15.29■□□□□ 0.04
USP44-203ENST00000537435 ROPN1Q9HAT0 212 aaPredicted RBP15.29■□□□□ 0.04
USP44-203ENST00000537435 C1orf112Q9NSG2 853 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 GARTP22102 1010 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 CHKAP35790 457 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 C2CD6Q53TS8 623 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 MFSD5Q6N075 450 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 LLGL2Q6P1M3 1020 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 TAOK1Q7L7X3 1001 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 ZNF516Q92618 1163 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
USP44-203ENST00000537435 AVENQ9NQS1 362 aaPredicted RBP15.29■□□□□ 0.04
USP44-203ENST00000537435 KLC4Q9NSK0 619 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 MYPNQ86TC9 1320 aa15.29■□□□□ 0.04
USP44-203ENST00000537435 ASAP2O43150 1006 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 ZC3H11AO75152 810 aaKnown RBP eCLIP15.28■□□□□ 0.04
USP44-203ENST00000537435 STBD1O95210 358 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 IFNAR2P48551 515 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 MTMR2Q13614 643 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 TRIP13Q15645 432 aaPredicted RBP15.28■□□□□ 0.04
USP44-203ENST00000537435 BRDTQ58F21 947 aaPredicted RBP15.28■□□□□ 0.04
USP44-203ENST00000537435 RHBDF2Q6PJF5 856 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 TAS1R3Q7RTX0 852 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 EXOC3L1Q86VI1 746 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 P3H4Q92791 437 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 MTFR1LQ9H019 292 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 KDM4CQ9H3R0 1056 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 ZNRF3Q9ULT6 936 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 TELO2Q9Y4R8 837 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 RIPK3Q9Y572 518 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 ITIH2P19823 946 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 CCND2P30279 289 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 CNGA2Q16280 664 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 SWT1Q5T5J6 900 aaKnown RBP15.28■□□□□ 0.04
USP44-203ENST00000537435 SWSAP1Q6NVH7 229 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 C15orf39Q6ZRI6 1047 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 PIGWQ7Z7B1 504 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 VSIG10LQ86VR7 867 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 NIM1KQ8IY84 436 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 MAIP1Q8WWC4 291 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 ATP6V0A1Q93050 837 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 SNF8Q96H20 258 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 FAM81BQ96LP2 452 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 SENP7Q9BQF6 1050 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 DCLK3Q9C098 648 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 CCDC134Q9H6E4 229 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 XPNPEP1Q9NQW7 623 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 RNF146Q9NTX7 359 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 DNAJC17Q9NVM6 304 aaKnown RBP15.28■□□□□ 0.04
USP44-203ENST00000537435 PCDHB2Q9Y5E7 798 aa15.28■□□□□ 0.04
USP44-203ENST00000537435 NR3C2P08235 984 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.04
USP44-203ENST00000537435 GHRP10912 638 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 IVDP26440 423 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 SLC1A1P43005 524 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 SP4Q02446 784 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 PTK6Q13882 451 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 DAB2IPQ5VWQ8 1189 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 ANKS4BQ8N8V4 417 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 GPRASP2Q96D09 838 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 ATG4CQ96DT6 458 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 DDX27Q96GQ7 796 aaKnown RBP15.27■□□□□ 0.04
USP44-203ENST00000537435 ELAC2Q9BQ52 826 aaKnown RBP15.27■□□□□ 0.04
USP44-203ENST00000537435 MYOZ2Q9NPC6 264 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 HAUS2Q9NVX0 235 aa15.27■□□□□ 0.04
USP44-203ENST00000537435 SEPT9Q9UHD8 586 aaPredicted RBP15.27■□□□□ 0.04
USP44-203ENST00000537435 CCT8L1PA6NM43 557 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 VWA5AO00534 786 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 DGAT1O75907 488 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 MYBL1P10243 752 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 NSFP46459 744 aaKnown RBP15.27■□□□□ 0.03
USP44-203ENST00000537435 ITGA8P53708 1063 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 CXCL9Q07325 125 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 ZNF677Q86XU0 584 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 MCPH1Q8NEM0 835 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 IPO4Q8TEX9 1081 aaKnown RBP15.27■□□□□ 0.03
USP44-203ENST00000537435 TEPSINQ96N21 525 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 PDLIM7Q9NR12 457 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 SAMD15Q9P1V8 674 aa15.27■□□□□ 0.03
USP44-203ENST00000537435 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.03
USP44-203ENST00000537435 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.27■□□□□ 0.03
USP44-203ENST00000537435 ZNFX1Q9P2E3 1918 aaKnown RBP15.27■□□□□ 0.03
USP44-203ENST00000537435 KCNA2P16389 499 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 TNNI1P19237 187 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 MAN1A1P33908 653 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 ENPEPQ07075 957 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 ITIH4Q14624 930 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 WDR44Q5JSH3 913 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 SPOPLQ6IQ16 392 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 SYDE1Q6ZW31 735 aaPredicted RBP15.26■□□□□ 0.03
USP44-203ENST00000537435 FUKQ8N0W3 1084 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 GRK7Q8WTQ7 553 aa15.26■□□□□ 0.03
USP44-203ENST00000537435 ARHGEF2Q92974 986 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms