RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 ZBTB8BQ8NAP8 495 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 PYROXD1Q8WU10 500 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 TGFBRAP1Q8WUH2 860 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 RPS6KC1Q96S38 1066 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 SSU72Q9NP77 194 aaKnown RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 DNAJC12Q9UKB3 198 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 APOBEC2Q9Y235 224 aaKnown RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 EME2A4GXA9 379 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 ART3Q13508 389 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 CCDC153Q494R4 210 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 ARMC3Q5W041 872 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 JAMLQ86YT9 394 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 THAP11Q96EK4 314 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 BHMG1C9JSJ3 638 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 H7C0C1 242 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 RGL2O15211 777 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 GNAZP19086 355 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 CASP2P42575 452 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ATP5OP48047 213 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 NEK2P51955 445 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 KRT81Q14533 505 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 IZUMO2Q6UXV1 221 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF804AQ7Z570 1209 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 MPP4Q96JB8 637 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF333Q96JL9 665 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 NLRP3Q96P20 1036 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 KANSL2Q9H9L4 492 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 DDX43Q9NXZ2 648 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 SEPT10Q9P0V9 454 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ZNF219Q9P2Y4 722 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 KDM3BQ7LBC6 1761 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PDE8AO60658 829 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 LGR5O75473 907 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PYGLP06737 847 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PYGBP11216 843 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 TNNI1P19237 187 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 TCIRG1Q13488 830 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 TBC1D10BQ4KMP7 808 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 SCYL2Q6P3W7 929 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 BTBD9Q96Q07 612 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 MED15Q96RN5 788 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 LY9Q9HBG7 655 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 GPAMQ9HCL2 828 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 XDHP47989 1333 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 MROH5Q6ZUA9 1318 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 GOLGA8RI6L899 631 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 AREL1O15033 823 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 LPXNO60711 386 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 GPC4O75487 556 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 RPL5P46777 297 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 RFX5P48382 616 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 IGBP1P78318 339 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 LSAMPQ13449 338 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 BARGINQ6ZT62 677 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 NLGN1Q8N2Q7 840 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 SDCCAG3Q96C92 435 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 C1orf112Q9NSG2 853 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 MYH7BA7E2Y1 1941 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 H3BNX3 289 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 CAPN9O14815 690 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 GNPATO15228 680 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 KCNJ2P63252 427 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 OVGP1Q12889 678 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 CENPPQ6IPU0 288 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 BORAQ6PGQ7 559 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 B3GNT6Q6ZMB0 384 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 APBB2Q92870 758 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 IFT43Q96FT9 208 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PIGSQ96S52 555 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 APOL6Q9BWW8 343 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 OLFML3Q9NRN5 406 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 SQORQ9Y6N5 450 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 UMODL1Q5DID0 1318 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 C10orf71Q711Q0 1435 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 CLASP2O75122 1294 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 POLR2EP19388 210 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 DYNLL1P63167 89 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PDIA2Q13087 525 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 MAPK7Q13164 816 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 RASA2Q15283 850 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 TRIM59Q8IWR1 403 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 LSM14AQ8ND56 463 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 MTBPQ96DY7 904 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ANKFY1Q9P2R3 1169 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 STRIP2Q9ULQ0 834 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 PABPN1LA6NDY0 278 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 FAM47DPA6NHR8 397 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 B2RBV5 119 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 H3BRJ5 948 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 SMAPO00193 183 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 MAGEB2O15479 319 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 TPD52L2O43399 206 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ABHD2P08910 425 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 HIBADHP31937 336 aaKnown RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ATXN3P54252 364 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-213ENST00000537002 RASGRF1Q13972 1273 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 SLC29A2Q14542 456 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 CNGA2Q16280 664 aa5.7□□□□□ -1.5
PTPRD-213ENST00000537002 ASTE1Q2TB18 679 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms