RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 RIMBP2O15034 1052 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ZBTB5O15062 677 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 EPHB6O15197 1021 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 TM9SF1O15321 606 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 SPOPO43791 374 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ECE2O60344 883 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 DIAPH2O60879 1101 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 COBLO75128 1261 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ZBED4O75132 1171 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ZC3H11AO75152 810 aaKnown RBP eCLIP6.2□□□□□ -1.42
CHD4-206ENST00000536999 BBOX1O75936 387 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 TGDSO95455 350 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 SSBP05455 408 aaKnown RBP eCLIP6.2□□□□□ -1.42
CHD4-206ENST00000536999 RPSAP08865 295 aaKnown RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 SNHG28P0DPA3 235 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 RARAP10276 462 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 CCL5P13501 91 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 BRAFP15056 766 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 CYP11B2P19099 503 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 PTPN4P29074 926 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 GTF2H1P32780 548 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 COILP38432 576 aaPredicted RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 MFAP3P55082 362 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 OCRLQ01968 901 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 AUHQ13825 339 aaKnown RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 RASA3Q14644 834 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ENOX2Q16206 610 aaKnown RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 MUM1Q2TAK8 710 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 HSP90AA5PQ58FG0 334 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 MAP3K21Q5TCX8 1036 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 LGSNQ5TDP6 509 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ZNF697Q5TEC3 545 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 TCERG1LQ5VWI1 586 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 FAM109BQ6ICB4 259 aaPredicted RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 CCDC62Q6P9F0 684 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 TRIM72Q6ZMU5 477 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 CENPUQ71F23 418 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 MIGA2Q7L4E1 593 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 EPM2AIP1Q7L775 607 aaPredicted RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 SLC13A5Q86YT5 568 aaPredicted RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 C12orf56Q8IXR9 622 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 SP8Q8IXZ3 490 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 LRRC34Q8IZ02 419 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 C7orf61Q8IZ16 206 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ALDH16A1Q8IZ83 802 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 GALNT15Q8N3T1 639 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 LRRC8CQ8TDW0 803 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 AGAP11Q8TF27 550 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 DCAF4Q8WV16 495 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 THOC1Q96FV9 657 aaKnown RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 VCPIP1Q96JH7 1222 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 NACC1Q96RE7 527 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 TGS1Q96RS0 853 aaKnown RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 SMC6Q96SB8 1091 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 PLIN2Q99541 437 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 AGPAT1Q99943 283 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 CENPKQ9BS16 269 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 FRMD8Q9BZ67 464 aaPredicted RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 WDR11Q9BZH6 1224 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 PPP1R12CQ9BZL4 782 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 CCDC113Q9H0I3 377 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 RNF208Q9H0X6 261 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 RABEP2Q9H5N1 569 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 PARVGQ9HBI0 331 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ETNK1Q9HBU6 452 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 MRPL47Q9HD33 250 aaKnown RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 KCNK9Q9NPC2 374 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 IL17RBQ9NRM6 502 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 MRGBPQ9NV56 204 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 CYP39A1Q9NYL5 469 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 THEGQ9P2T0 379 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 BIN2Q9UBW5 565 aaPredicted RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 ZNF212Q9UDV6 495 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 PRKAG3Q9UGI9 489 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 ANGPTL2Q9UKU9 493 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 TFR2Q9UP52 801 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 EXOC7Q9UPT5 735 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 KIAA1024Q9UPX6 916 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 MTO1Q9Y2Z2 717 aaKnown RBP6.2□□□□□ -1.42
CHD4-206ENST00000536999 ALG6Q9Y672 507 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 MROH7Q68CQ1 1323 aa6.2□□□□□ -1.42
CHD4-206ENST00000536999 GPR75-ASB3A0A0A6YYF3 556 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 GSTTP1A0A1W2PQM5 241 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 TMEM120BA0PK00 339 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 G3V3G9 751 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 H0YCG3 227 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DDX3XO00571 662 aaKnown RBP eCLIP6.19□□□□□ -1.42
CHD4-206ENST00000536999 FSCN2O14926 492 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 DDX3YO15523 660 aaKnown RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 MAP3K7O43318 606 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 CYTH3O43739 400 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 SORBS3O60504 671 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 CSDE1O75534 798 aaKnown RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 SPAG6O75602 509 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ZNF189O75820 626 aaPredicted RBP6.19□□□□□ -1.42
CHD4-206ENST00000536999 UBOX5O94941 541 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 FAM13AO94988 1023 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 HLA-DOAP06340 250 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 PDHBP11177 359 aa6.19□□□□□ -1.42
CHD4-206ENST00000536999 ALAS1P13196 640 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms