RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 GJB6O95452 261 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 GOLGA8HP0CJ92 632 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 RARAP10276 462 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 KRT13P13646 458 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 RAG1P15918 1043 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 ATP2A2P16615 1042 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 PLCG2P16885 1265 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SLC9A1P19634 815 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 RASA1P20936 1047 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SOX5P35711 763 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 ADCYAP1R1P41586 468 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 MSH2P43246 934 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 HMGCS2P54868 508 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 PLTPP55058 493 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 CAV1Q03135 178 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 FPGSQ05932 587 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SPP2Q13103 211 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 MKRN4PQ13434 485 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 PRPF4BQ13523 1007 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 BLMHQ13867 455 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 PLS1Q14651 629 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 RBBP5Q15291 538 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 DIXDC1Q155Q3 683 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 NFIL3Q16649 462 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 KNOP1Q1ED39 458 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 BMT2Q1RMZ1 405 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 AAK1Q2M2I8 961 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 ACCSLQ4AC99 568 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 TNFAIP8L3Q5GJ75 292 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 MORN1Q5T089 497 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 AP1ARQ63HQ0 302 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 RNF43Q68DV7 783 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 CDCA2Q69YH5 1023 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 HHIPL2Q6UWX4 724 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 ZDHHC24Q6UX98 284 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 CEP128Q6ZU80 1094 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 C16orf86Q6ZW13 317 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 KCNK18Q7Z418 384 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SPATA21Q7Z572 469 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SLFN12Q8IYM2 578 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 PROCA1Q8NCQ7 364 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 RNF25Q96BH1 459 aaPredicted RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SPDL1Q96EA4 605 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 DYNLL2Q96FJ2 89 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 THOC1Q96FV9 657 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 MRIQ9BWK5 157 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 STK33Q9BYT3 514 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 TRIM31Q9BZY9 425 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 ADAM7Q9H2U9 754 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 EPB41L4BQ9H329 900 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 ARHGEF3Q9NR81 526 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 TYW1Q9NV66 732 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 TMEM260Q9NX78 707 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SLC5A4Q9NY91 659 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 PCDHA12Q9UN75 941 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 RPL26L1Q9UNX3 145 aaKnown RBP8.32□□□□□ -1.08
CPSF7-216ENST00000536548 SNX24Q9Y343 169 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 ZDBF2Q9HCK1 2354 aa8.32□□□□□ -1.08
CPSF7-216ENST00000536548 ATAD5Q96QE3 1844 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 ANKRD62A6NC57 917 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 PRR33A8MZF0 331 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 RIPK2O43353 540 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 AHCYL1O43865 530 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 TTLL1O95922 423 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 LMNAP02545 664 aaKnown RBP8.31□□□□□ -1.08
CPSF7-216ENST00000536548 SHBGP04278 402 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 NEFHP12036 1026 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 ACTN1P12814 892 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 ALAS1P13196 640 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 GAP43P17677 238 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 CYP11B2P19099 503 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 TNFAIP3P21580 790 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 CTNNA2P26232 953 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 PRDX5P30044 214 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 MAN1A1P33908 653 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 RGS2P41220 211 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 PTGIRP43119 386 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 NOVP48745 357 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 CALCOCO2Q13137 446 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 ACVR2BQ13705 512 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 SLC29A2Q14542 456 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 SETDB1Q15047 1291 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 TAF11Q15544 211 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 ZRSR2Q15696 482 aaKnown RBP8.31□□□□□ -1.08
CPSF7-216ENST00000536548 PARP6Q2NL67 630 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 DCAF17Q5H9S7 520 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-216ENST00000536548 TCERG1LQ5VWI1 586 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 NAIF1Q69YI7 327 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-216ENST00000536548 DPY19L2P1Q6NXN4 242 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 MOXD1Q6UVY6 613 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 PPP1R21Q6ZMI0 780 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 ARHGEF18Q6ZSZ5 1173 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 SYDE1Q6ZW31 735 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-216ENST00000536548 STXBP4Q6ZWJ1 553 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 INTS8Q75QN2 995 aaKnown RBP8.31□□□□□ -1.08
CPSF7-216ENST00000536548 C16orf59Q7L2K0 433 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 GPR142Q7Z601 462 aa8.31□□□□□ -1.08
CPSF7-216ENST00000536548 AGGF1Q8N302 714 aaeCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms