RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 SYT1P21579 422 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 TKTP29401 623 aaKnown RBP15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 MARCKSP29966 332 aaPredicted RBP15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 GBP2P32456 591 aaPredicted RBP15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 BRCC3P46736 316 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 NCKAP1LP55160 1127 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 CEBPZQ03701 1054 aaKnown RBP15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 XKR4Q5GH76 650 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 FAM173BQ6P4H8 233 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 HAUS6Q7Z4H7 955 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 UBALD2Q8IYN6 164 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 FBXL6Q8N531 539 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 MYCT1Q8N699 235 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 C3orf58Q8NDZ4 430 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 RAD54LQ92698 747 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 C18orf25Q96B23 403 aaPredicted RBP15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 WDR6Q9NNW5 1121 aaKnown RBP15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 SLC38A7Q9NVC3 462 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 ZDHHC7Q9NXF8 308 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 ODF2LQ9ULJ1 636 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 CLUHO75153 1309 aa15.63■□□□□ 0.09
RTN3P1-201ENST00000536295 H0YCG3 227 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 K7ENM7 598 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 PODXLO00592 558 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 CLDN3O15551 220 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 MEFVO15553 781 aaPredicted RBP15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 N4BP1O75113 896 aaKnown RBP15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 ZMYND10O75800 440 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 FGFR3P22607 806 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 OR1D2P34982 312 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 RESTQ13127 1097 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 LIN9Q5TKA1 542 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 PDXDC1Q6P996 788 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 CD300LGQ6UXG3 332 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 CYP26C1Q6V0L0 522 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 ZPBP2Q6X784 338 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 STAMQ92783 540 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 EPSTI1Q96J88 318 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 PRKD2Q9BZL6 878 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 CNTN3Q9P232 1028 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 FBXW11Q9UKB1 542 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 MYH11P35749 1972 aa15.62■□□□□ 0.09
RTN3P1-201ENST00000536295 TRAPPC3O43617 180 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 TBCAO75347 108 aaKnown RBP15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 C1RP00736 705 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 C8AP07357 584 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 KCNE1P15382 129 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 LIG4P49917 911 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 VCPP55072 806 aaKnown RBP15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 SPAG1Q07617 926 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 MCL1Q07820 350 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 PTPAQ15257 358 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 SLC10A6Q3KNW5 377 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 PPM1LQ5SGD2 360 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 IER5LQ5T953 404 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 USP49Q70CQ1 688 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 GET4Q7L5D6 327 aaPredicted RBP15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 LARP4BQ92615 738 aaKnown RBP15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 DDX27Q96GQ7 796 aaKnown RBP15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 HAPLN2Q9GZV7 340 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 PARVGQ9HBI0 331 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 POLIQ9UNA4 740 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 CDY1Q9Y6F8 540 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 TRIP11Q15643 1979 aa15.61■□□□□ 0.09
RTN3P1-201ENST00000536295 K7ELQ4 463 aaPredicted RBP15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 HNRNPDLO14979 420 aaKnown RBP15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 CCL16O15467 120 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 TRAK2O60296 914 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 CXCL8P10145 99 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 RSPO2Q6UXX9 243 aaPredicted RBP15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 TMEM130Q8N3G9 435 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 SLC7A14Q8TBB6 771 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 RSAD2Q8WXG1 361 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 INTS4Q96HW7 963 aaKnown RBP15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 CLIC6Q96NY7 704 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 MYADMQ96S97 322 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 RHOBTB2Q9BYZ6 727 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 CCSER1Q9C0I3 900 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 KCNH6Q9H252 994 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 KCNK12Q9HB15 430 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 MTRRQ9UBK8 725 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 TUBGCP4Q9UGJ1 667 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 FBXO2Q9UK22 296 aaPredicted RBP15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 TBX20Q9UMR3 447 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 NUB1Q9Y5A7 615 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 VWA8A3KMH1 1905 aa15.6■□□□□ 0.09
RTN3P1-201ENST00000536295 MYO10Q9HD67 2058 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 CLTAP09496 248 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 NMT1P30419 496 aaKnown RBP15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 DDIT3P35638 169 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 TNFSF9P41273 254 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 ZNF131P52739 623 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 ARPP19P56211 112 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 NTHL1P78549 312 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 TDGQ13569 410 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 RAB33AQ14088 237 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 AXDND1Q5T1B0 1012 aaPredicted RBP15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 ANKS3Q6ZW76 656 aa15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 GRASPQ7Z6J2 395 aaPredicted RBP15.59■□□□□ 0.09
RTN3P1-201ENST00000536295 PRSS33Q8NF86 280 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms