RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PIK3CAP42336 1068 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 GNGT1P63211 74 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 BIRC3Q13489 604 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 MOGSQ13724 837 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 TTLL12Q14166 644 aaPredicted RBP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 HLTFQ14527 1009 aaKnown RBP eCLIP14.34□□□□□ -0.11
VPS33B-202ENST00000535906 ACAD10Q6JQN1 1059 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 RPS6KC1Q96S38 1066 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 NEUROG2Q9H2A3 272 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 KCNH4Q9UQ05 1017 aa14.34□□□□□ -0.11
VPS33B-202ENST00000535906 SLC25A27O95847 323 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 PEX5P50542 639 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 CLEC16AQ2KHT3 1053 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 WDR44Q5JSH3 913 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 EMC10Q5UCC4 262 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 SCARA3Q6AZY7 606 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 MAATS1Q7Z4T9 603 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 CCDC26Q8TAB7 109 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 GLG1Q92896 1179 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 CD101Q93033 1021 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 GPR20Q99678 358 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 AZI2Q9H6S1 392 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 CNTNAP2Q9UHC6 1331 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 LDHAP00338 332 aaKnown RBP14.33□□□□□ -0.12
VPS33B-202ENST00000535906 HARSP12081 509 aaKnown RBP14.33□□□□□ -0.12
VPS33B-202ENST00000535906 PTENP60484 403 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
VPS33B-202ENST00000535906 DNAJC21Q5F1R6 531 aaKnown RBP14.33□□□□□ -0.12
VPS33B-202ENST00000535906 KCTD16Q68DU8 428 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 UBL4BQ8N7F7 174 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 OR5B17Q8NGF7 314 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 OPTNQ96CV9 577 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 APOBEC3GQ9HC16 384 aaKnown RBP14.33□□□□□ -0.12
VPS33B-202ENST00000535906 SPON1Q9HCB6 807 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 MCM3APO60318 1980 aa14.33□□□□□ -0.12
VPS33B-202ENST00000535906 DNAJC25-GNG10A0A024R161 153 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 ZBTB42B2RXF5 422 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 DAPK3O43293 454 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 UNGP13051 313 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-202ENST00000535906 TMEM63BQ5T3F8 832 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 KDM7AQ6ZMT4 941 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 SH2D3CQ8N5H7 860 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 LRRC45Q96CN5 670 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 NAP1L3Q99457 506 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-202ENST00000535906 PCDHB2Q9Y5E7 798 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 TRIM66O15016 1216 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 CLDN3O15551 220 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 MSCO60682 206 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 ACO1P21399 889 aaKnown RBP14.32□□□□□ -0.12
VPS33B-202ENST00000535906 NF2P35240 595 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 PPIL2Q13356 520 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 CELF3Q5SZQ8 465 aaKnown RBP14.32□□□□□ -0.12
VPS33B-202ENST00000535906 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 LRIG3Q6UXM1 1119 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-202ENST00000535906 C10orf67Q8IYJ2 551 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 LRRC71Q8N4P6 559 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 CPA5Q8WXQ8 436 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
VPS33B-202ENST00000535906 SEC14L1Q92503 715 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 UPF1Q92900 1129 aaKnown RBP eCLIP14.32□□□□□ -0.12
VPS33B-202ENST00000535906 FAM81BQ96LP2 452 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 CGRRF1Q99675 332 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 UVRAGQ9P2Y5 699 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 CNOT8Q9UFF9 292 aaKnown RBP14.32□□□□□ -0.12
VPS33B-202ENST00000535906 PLAAQ9Y263 795 aa14.32□□□□□ -0.12
VPS33B-202ENST00000535906 SRGAP2CP0DJJ0 459 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 PYGMP11217 842 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 YBX3P16989 372 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS33B-202ENST00000535906 TNFSF9P41273 254 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 ZDHHC14Q8IZN3 488 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 BCAS4Q8TDM0 211 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 COPS5Q92905 334 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 ATP6V1G3Q96LB4 118 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 MMP19Q99542 508 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 TRIM51Q9BSJ1 452 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 RASSF4Q9H2L5 321 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 UMODL1Q5DID0 1318 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 PCNTO95613 3336 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 HMGB1P1B2RPK0 211 aaPredicted RBP14.31□□□□□ -0.12
VPS33B-202ENST00000535906 NOP56O00567 594 aaKnown RBP14.31□□□□□ -0.12
VPS33B-202ENST00000535906 SPOPO43791 374 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 FAM189A1O60320 539 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 LGR5O75473 907 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 CFHP08603 1231 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 FLT3P36888 993 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 HSD17B3P37058 310 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 LAMTOR4Q0VGL1 99 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 CUL2Q13617 745 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 KCTD2Q14681 263 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 C2CD6Q53TS8 623 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 WDR78Q5VTH9 848 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 IER5Q5VY09 327 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 GPAT2Q6NUI2 795 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS33B-202ENST00000535906 ZBTB33Q86T24 672 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 MORC4Q8TE76 937 aa14.31□□□□□ -0.12
VPS33B-202ENST00000535906 FAM167AQ96KS9 214 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms