RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 CCDC189A1A4V9 331 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 PRICKLE3O43900 615 aaPredicted RBP8.87□□□□□ -0.99
LMO3-212ENST00000535535 NAT2P11245 290 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 CACNB2Q08289 660 aaPredicted RBP8.87□□□□□ -0.99
LMO3-212ENST00000535535 CYP4F3Q08477 520 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 FILIP1LQ4L180 1135 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 CCDC92Q53HC0 331 aaPredicted RBP8.87□□□□□ -0.99
LMO3-212ENST00000535535 LARP1BQ659C4 914 aaKnown RBP8.87□□□□□ -0.99
LMO3-212ENST00000535535 POMZP3Q6PJE2 187 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 FASTKD5Q7L8L6 764 aaKnown RBP8.87□□□□□ -0.99
LMO3-212ENST00000535535 VGLL2Q8N8G2 317 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 PLEKHO2Q8TD55 490 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 ANAPC16Q96DE5 110 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 GPATCH3Q96I76 525 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 MRGPRX3Q96LB0 322 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 NOX5Q96PH1 765 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 NAP1L4Q99733 375 aaKnown RBP8.87□□□□□ -0.99
LMO3-212ENST00000535535 GPRC5CQ9NQ84 441 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 GABBR1Q9UBS5 961 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 SIT1Q9Y3P8 196 aa8.87□□□□□ -0.99
LMO3-212ENST00000535535 PPFIA2O75334 1257 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 FRAT2O75474 233 aaPredicted RBP8.86□□□□□ -0.99
LMO3-212ENST00000535535 FUCA1P04066 466 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 NTRK1P04629 796 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 THBDP07204 575 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 TCP10Q12799 353 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 RTP5Q14D33 572 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 NCAPHQ15003 741 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 CAVIN4Q5BKX8 364 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 GTF2IRD2BQ6EKJ0 949 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 C16orf87Q6PH81 154 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 GTF2IRD2Q86UP8 949 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 SEZ6LQ9BYH1 1024 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 CCSER2Q9H7U1 834 aa8.86□□□□□ -0.99
LMO3-212ENST00000535535 TMA7Q9Y2S6 64 aaKnown RBP8.86□□□□□ -0.99
LMO3-212ENST00000535535 HMGCRP04035 888 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 NFKB2Q00653 900 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 CCDC184Q52MB2 194 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 MFSD4BQ5TF39 518 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 NT5DC1Q5TFE4 455 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 JAKMIP3Q5VZ66 844 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 CDC42EP5Q6NZY7 148 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 NOP9Q86U38 636 aaKnown RBP8.85□□□□□ -0.99
LMO3-212ENST00000535535 LCA5Q86VQ0 697 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 LMNTD2Q8IXW0 634 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 SCYL3Q8IZE3 742 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 CARFQ8N187 725 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 NPLOC4Q8TAT6 608 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 USP33Q8TEY7 942 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 COA7Q96BR5 231 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 KAZALD1Q96I82 304 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 RMDN2Q96LZ7 410 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 GUCD1Q96NT3 240 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 LGR4Q9BXB1 951 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 DEF6Q9H4E7 631 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 AFG3L2Q9Y4W6 797 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 ZHX2Q9Y6X8 837 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 RPTORQ8N122 1335 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 RFX7Q2KHR2 1363 aa8.85□□□□□ -0.99
LMO3-212ENST00000535535 TMCO5BA8MYB1 307 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 TPPPO94811 219 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 PDE8BO95263 885 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 C8BP07358 591 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 IBSPP21815 317 aaPredicted RBP8.84□□□□□ -0.99
LMO3-212ENST00000535535 EFEMP1Q12805 493 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 PTPROQ16827 1216 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 FAM110CQ1W6H9 321 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 LRRC24Q50LG9 513 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 GADL1Q6ZQY3 521 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 DCP2Q8IU60 420 aaKnown RBP8.84□□□□□ -0.99
LMO3-212ENST00000535535 ANKRD13CQ8N6S4 541 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 C17orf50Q8WW18 174 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 SYAP1Q96A49 352 aaPredicted RBP8.84□□□□□ -0.99
LMO3-212ENST00000535535 SUCLG2Q96I99 432 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 BDH2Q9BUT1 245 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 IQCGQ9H095 443 aaKnown RBP8.84□□□□□ -0.99
LMO3-212ENST00000535535 NKX2-4Q9H2Z4 354 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 C11orf49Q9H6J7 331 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 C9orf78Q9NZ63 289 aaPredicted RBP8.84□□□□□ -0.99
LMO3-212ENST00000535535 CWC15Q9P013 229 aaKnown RBP8.84□□□□□ -0.99
LMO3-212ENST00000535535 MARCH2Q9P0N8 246 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 NOL7Q9UMY1 257 aaKnown RBP8.84□□□□□ -0.99
LMO3-212ENST00000535535 PFASO15067 1338 aa8.84□□□□□ -0.99
LMO3-212ENST00000535535 CDK5RAP2Q96SN8 1893 aa8.83□□□□□ -1
LMO3-212ENST00000535535 CCDC159P0C7I6 412 aa8.83□□□□□ -1
LMO3-212ENST00000535535 SKILP12757 684 aa8.83□□□□□ -1
LMO3-212ENST00000535535 ATF4P18848 351 aaPredicted RBP8.83□□□□□ -1
LMO3-212ENST00000535535 DDX10Q13206 875 aaKnown RBP8.83□□□□□ -1
LMO3-212ENST00000535535 TMED1Q13445 227 aa8.83□□□□□ -1
LMO3-212ENST00000535535 ZSCAN26Q16670 478 aa8.83□□□□□ -1
LMO3-212ENST00000535535 INF2Q27J81 1249 aa8.83□□□□□ -1
LMO3-212ENST00000535535 METTL24Q5JXM2 366 aa8.83□□□□□ -1
LMO3-212ENST00000535535 FAM109BQ6ICB4 259 aaPredicted RBP8.83□□□□□ -1
LMO3-212ENST00000535535 DPH6Q7L8W6 267 aa8.83□□□□□ -1
LMO3-212ENST00000535535 CCDC91Q7Z6B0 441 aa8.83□□□□□ -1
LMO3-212ENST00000535535 ZFPM1Q8IX07 1006 aa8.83□□□□□ -1
LMO3-212ENST00000535535 FAM184AQ8NB25 1140 aa8.83□□□□□ -1
LMO3-212ENST00000535535 FRS2Q8WU20 508 aa8.83□□□□□ -1
LMO3-212ENST00000535535 PRKRIP1Q9H875 184 aaPredicted RBP8.83□□□□□ -1
LMO3-212ENST00000535535 RMI1Q9H9A7 625 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms