RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 MARCKSP29966 332 aaPredicted RBP12.97□□□□□ -0.33
KNTC1-208ENST00000535410 CLCNKBP51801 687 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 ZNF131P52739 623 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 RESTQ13127 1097 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 MCM6Q14566 821 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 SLC39A14Q15043 492 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 PTPAQ15257 358 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 NAB2Q15742 525 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 PSMD5Q16401 504 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 SLFN12LQ6IEE8 588 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 LILRA6Q6PI73 481 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 SV2BQ7L1I2 683 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 SUGP1Q8IWZ8 645 aaKnown RBP12.97□□□□□ -0.33
KNTC1-208ENST00000535410 CD302Q8IX05 232 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 KREMEN2Q8NCW0 462 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 HASPINQ8TF76 798 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 SMG7Q92540 1137 aaKnown RBP12.97□□□□□ -0.33
KNTC1-208ENST00000535410 FAM122AQ96E09 287 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 SNX27Q96L92 541 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 PRRX2Q99811 253 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 REEP2Q9BRK0 252 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 PAAF1Q9BRP4 392 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 LRRC27Q9C0I9 530 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 BLOC1S4Q9NUP1 217 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.97□□□□□ -0.33
KNTC1-208ENST00000535410 CNTN3Q9P232 1028 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 SEL1LQ9UBV2 794 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 SORCS3Q9UPU3 1222 aa12.97□□□□□ -0.33
KNTC1-208ENST00000535410 NPHP3-ACAD11A0A0J9YXS1 232 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 TMEM221A6NGB7 291 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 C2CD4DB7Z1M9 353 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 F8W810 466 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 H7C4K7 107 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 K7ENM7 598 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 M0R296 226 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 PODXLO00592 558 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 HNRNPDLO14979 420 aaKnown RBP12.96□□□□□ -0.33
KNTC1-208ENST00000535410 SYN3O14994 580 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 XYLBO75191 536 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 WEE2P0C1S8 567 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 FGFR3P22607 806 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 SP100P23497 879 aaPredicted RBP12.96□□□□□ -0.33
KNTC1-208ENST00000535410 PAX3P23760 479 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 STK38Q15208 465 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 UVSSAQ2YD98 709 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 RTP2Q5QGT7 225 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 LNX1Q8TBB1 728 aaPredicted RBP12.96□□□□□ -0.33
KNTC1-208ENST00000535410 NXPE3Q969Y0 559 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 PBXIP1Q96AQ6 731 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 EPSTI1Q96J88 318 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 PRKD2Q9BZL6 878 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 WDR6Q9NNW5 1121 aaKnown RBP12.96□□□□□ -0.33
KNTC1-208ENST00000535410 LIMD1Q9UGP4 676 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 FBXO2Q9UK22 296 aaPredicted RBP12.96□□□□□ -0.33
KNTC1-208ENST00000535410 EXOC7Q9UPT5 735 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 MTMR6Q9Y217 621 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 BACE2Q9Y5Z0 518 aa12.96□□□□□ -0.33
KNTC1-208ENST00000535410 ABLIM1O14639 778 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 OGTO15294 1046 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 ZMYND10O75800 440 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 PAPLNO95428 1278 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 PIGRP01833 764 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 SPATA31D3P0C874 917 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 GAP43P17677 238 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 HOXA9P31269 272 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 POU5F1Q01860 360 aaKnown RBP12.95□□□□□ -0.34
KNTC1-208ENST00000535410 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
KNTC1-208ENST00000535410 GRIN1Q05586 938 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 PPP2R3AQ06190 1150 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 RAB33AQ14088 237 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 POSTNQ15063 836 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 PPM1LQ5SGD2 360 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 PRSS55Q6UWB4 352 aaPredicted RBP12.95□□□□□ -0.34
KNTC1-208ENST00000535410 SPATA31D4Q6ZUB0 917 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 CEP120Q8N960 986 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 APPL2Q8NEU8 664 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 HVCN1Q96D96 273 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 ZBTB45Q96K62 511 aaPredicted RBP12.95□□□□□ -0.34
KNTC1-208ENST00000535410 B3GALT6Q96L58 329 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 CLSTN3Q9BQT9 956 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 OXCT2Q9BYC2 517 aaPredicted RBP12.95□□□□□ -0.34
KNTC1-208ENST00000535410 ST6GALNAC4Q9H4F1 302 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 RPF1Q9H9Y2 349 aaKnown RBP12.95□□□□□ -0.34
KNTC1-208ENST00000535410 IGSF9Q9P2J2 1179 aa12.95□□□□□ -0.34
KNTC1-208ENST00000535410 ZFP37Q9Y6Q3 630 aaPredicted RBP12.95□□□□□ -0.34
KNTC1-208ENST00000535410 TDRD15B5MCY1 1934 aaKnown RBP12.94□□□□□ -0.34
KNTC1-208ENST00000535410 ARHGEF37A1IGU5 675 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 RPL17P18621 184 aaKnown RBP12.94□□□□□ -0.34
KNTC1-208ENST00000535410 CYP3A5P20815 502 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 ELF1P32519 619 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 OR1D2P34982 312 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 STAT6P42226 847 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 GTF2BQ00403 316 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 AMPD3Q01432 767 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 ALCAMQ13740 583 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 SLC10A6Q3KNW5 377 aa12.94□□□□□ -0.34
KNTC1-208ENST00000535410 ATL3Q6DD88 541 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms