RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 HEPACAM2A8MVW5 462 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 UPK3BL1B0FP48 263 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 PATE3B3GLJ2 98 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 UPK3BL2E5RIL1 263 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 ATG13O75143 517 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 MAFO75444 373 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-204ENST00000535180 CYP3A4P08684 503 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 CCR2P41597 374 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 SETQ01105 290 aaPredicted RBP11.96□□□□□ -0.49
VAMP1-204ENST00000535180 AP3B2Q13367 1082 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 KARSQ15046 597 aaKnown RBP11.96□□□□□ -0.49
VAMP1-204ENST00000535180 ZNF423Q2M1K9 1284 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 YAF2Q8IY57 180 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 IGDCC4Q8TDY8 1250 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 CRYGNQ8WXF5 182 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 E2F7Q96AV8 911 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 PAAF1Q9BRP4 392 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 EIF2AQ9BY44 585 aaKnown RBP11.96□□□□□ -0.49
VAMP1-204ENST00000535180 RAXQ9Y2V3 346 aa11.96□□□□□ -0.49
VAMP1-204ENST00000535180 PIEZO2Q9H5I5 2752 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 CCDC194A0A1B0GVG4 234 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 DCLK1O15075 740 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 MEFVO15553 781 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-204ENST00000535180 LRG1P02750 347 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 CLK2P49760 499 aaKnown RBP11.95□□□□□ -0.5
VAMP1-204ENST00000535180 FCHO2Q0JRZ9 810 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 LMAN2Q12907 356 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 ELAVL2Q12926 359 aaKnown RBP11.95□□□□□ -0.5
VAMP1-204ENST00000535180 GRIK3Q13003 919 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 TYW1BQ6NUM6 668 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 PDZD4Q76G19 769 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-204ENST00000535180 ZSCAN18Q8TBC5 510 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-204ENST00000535180 HASPINQ8TF76 798 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 HNRNPABQ99729 332 aaKnown RBP11.95□□□□□ -0.5
VAMP1-204ENST00000535180 CACNG4Q9UBN1 327 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 ZBTB47Q9UFB7 747 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-204ENST00000535180 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
VAMP1-204ENST00000535180 COL4A3BPQ9Y5P4 624 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 CDY1Q9Y6F8 540 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
VAMP1-204ENST00000535180 STBD1O95210 358 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 ADCY7P51828 1080 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 NAPAP54920 295 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 SEMA3BQ13214 749 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 XKR3Q5GH77 459 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 CYP4A22Q5TCH4 519 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 PMS2CLQ68D20 193 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 WWC2Q6AWC2 1192 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
VAMP1-204ENST00000535180 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 NCOA7Q8NI08 942 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 MDM1Q8TC05 714 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 SH2D3AQ9BRG2 576 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 GTSE1Q9NYZ3 720 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 MTRRQ9UBK8 725 aa11.94□□□□□ -0.5
VAMP1-204ENST00000535180 EVLQ9UI08 416 aaPredicted RBP11.94□□□□□ -0.5
VAMP1-204ENST00000535180 GOLGA4Q13439 2230 aaKnown RBP11.94□□□□□ -0.5
VAMP1-204ENST00000535180 ZMYM2Q9UBW7 1377 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 TMEM150BA6NC51 233 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 CCER2I3L3R5 266 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 J3QKU1 62 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 ATXN7O15265 892 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-204ENST00000535180 MOSPD3O75425 235 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 KIF4AO95239 1232 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 SRGAP2CP0DJJ0 459 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 AXLP30530 894 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 SFNP31947 248 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 GBP1P32455 592 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 ANTXR2P58335 489 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 TUSC3Q13454 348 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 ANKRD45Q5TZF3 282 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 PPP1R18Q6NYC8 613 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 NOTUMQ6P988 496 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-204ENST00000535180 CCNI2Q6ZMN8 369 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-204ENST00000535180 HACE1Q8IYU2 909 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 ZNF461Q8TAF7 563 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 TTC8Q8TAM2 541 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 RSPRY1Q96DX4 576 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 CCDC51Q96ER9 411 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 JPH2Q9BR39 696 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-204ENST00000535180 GPR88Q9GZN0 384 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 DIAPH3Q9NSV4 1193 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 EBF1Q9UH73 591 aa11.93□□□□□ -0.5
VAMP1-204ENST00000535180 ZNF638Q14966 1978 aaKnown RBP11.92□□□□□ -0.5
VAMP1-204ENST00000535180 COL6A6A6NMZ7 2263 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 SMCO2A6NFE2 343 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 ERLIN2O94905 339 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 FGFR3P22607 806 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 AKAP5P24588 427 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 JAK3P52333 1124 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 FAM193AP78312 1265 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 PCBP1Q15365 356 aaKnown RBP eCLIP11.92□□□□□ -0.5
VAMP1-204ENST00000535180 PRR16Q569H4 304 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 CYP2U1Q7Z449 544 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 C11orf74Q86VG3 221 aa11.92□□□□□ -0.5
VAMP1-204ENST00000535180 LSM14AQ8ND56 463 aaKnown RBP11.92□□□□□ -0.5
VAMP1-204ENST00000535180 PRPF31Q8WWY3 499 aaKnown RBP11.92□□□□□ -0.5
VAMP1-204ENST00000535180 CRELD1Q96HD1 420 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms