RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 OGTO15294 1046 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 PPP6R2O75170 966 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 TBCAO75347 108 aaKnown RBP11.35□□□□□ -0.59
CSDE1-217ENST00000534699 AFF1P51825 1210 aaKnown RBP11.35□□□□□ -0.59
CSDE1-217ENST00000534699 SNRPFP62306 86 aaKnown RBP11.35□□□□□ -0.59
CSDE1-217ENST00000534699 SMARCB1Q12824 385 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 PLD1Q13393 1074 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 SF3A1Q15459 793 aaKnown RBP11.35□□□□□ -0.59
CSDE1-217ENST00000534699 SLC8B1Q6J4K2 584 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 HAUS6Q7Z4H7 955 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 GPBP1Q86WP2 473 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 ASIC4Q96FT7 647 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 DUSP12Q9UNI6 340 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 TYMPP19971 482 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 MAGEA9P43362 315 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 NASPP49321 788 aaPredicted RBP11.35□□□□□ -0.59
CSDE1-217ENST00000534699 TDGQ13569 410 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 SLC39A14Q15043 492 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 FAM171A1Q5VUB5 890 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 STXBP4Q6ZWJ1 553 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 KCNK18Q7Z418 384 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 MAP4K3Q8IVH8 894 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 SMG7Q92540 1137 aaKnown RBP11.35□□□□□ -0.59
CSDE1-217ENST00000534699 TARS2Q9BW92 718 aaKnown RBP11.35□□□□□ -0.59
CSDE1-217ENST00000534699 BLOC1S4Q9NUP1 217 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 WNT16Q9UBV4 365 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 ZMYM5Q9UJ78 669 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 TBX20Q9UMR3 447 aa11.35□□□□□ -0.59
CSDE1-217ENST00000534699 CCDC195A0A1B0GUA6 201 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 SLC16A4O15374 487 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 TGM5O43548 720 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 TRAK2O60296 914 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 TBC1D4O60343 1298 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 KIF4AO95239 1232 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 CD2BP2O95400 341 aaKnown RBP11.34□□□□□ -0.59
CSDE1-217ENST00000534699 YEATS4O95619 227 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 FGF19O95750 216 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 LDHAP00338 332 aaKnown RBP11.34□□□□□ -0.59
CSDE1-217ENST00000534699 AARSP49588 968 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSDE1-217ENST00000534699 ZBTB6Q15916 424 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 LONRF3Q496Y0 759 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 ARSHQ5FYA8 562 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 RTP3Q9BQQ7 232 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 TCHPQ9BT92 498 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 OLFML3Q9NRN5 406 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 KLK14Q9P0G3 267 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 FBXO2Q9UK22 296 aaPredicted RBP11.34□□□□□ -0.59
CSDE1-217ENST00000534699 SZT2Q5T011 3432 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 TTC26A0AVF1 554 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 ANHXE9PGG2 379 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 IL18RAPO95256 599 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 LIG4P49917 911 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 PPP2R3AQ06190 1150 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 MYBPC2Q14324 1141 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 PPM1LQ5SGD2 360 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 SV2BQ7L1I2 683 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 TAS1R1Q7RTX1 841 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 ZBTB33Q86T24 672 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 AUTS2Q8WXX7 1259 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 PBXIP1Q96AQ6 731 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 ZNF707Q96C28 371 aaPredicted RBP11.34□□□□□ -0.59
CSDE1-217ENST00000534699 CLSTN3Q9BQT9 956 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 SLC2A4RGQ9NR83 387 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 DSEQ9UL01 958 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 C2CD2Q9Y426 696 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 NCOR1O75376 2440 aa11.34□□□□□ -0.59
CSDE1-217ENST00000534699 OR6C75A6NL08 312 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 SOBPA7XYQ1 873 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 PP2D1A8MPX8 630 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 M0QZQ0 153 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 PODXLO00592 558 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 ABLIM3O94929 683 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 HOXD11P31277 338 aaPredicted RBP11.33□□□□□ -0.59
CSDE1-217ENST00000534699 TCEAL8Q8IYN2 117 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 PIDD1Q9HB75 910 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 GDAQ9Y2T3 454 aa11.33□□□□□ -0.59
CSDE1-217ENST00000534699 A0A0B4J269 797 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 ZNF197O14709 1029 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 DTNBO60941 627 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 B3GAT3O94766 335 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 EDN1P05305 212 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 KRT18P05783 430 aaKnown RBP11.33□□□□□ -0.6
CSDE1-217ENST00000534699 PLCG1P19174 1290 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 SYT1P21579 422 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 AMPD3Q01432 767 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 SURF1Q15526 300 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 RRAGBQ5VZM2 374 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 ZNF280DQ6N043 979 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 CD300LGQ6UXG3 332 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 MYCT1Q8N699 235 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 BEST2Q8NFU1 509 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 ZNF461Q8TAF7 563 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 C2orf15Q8WU43 125 aaKnown RBP11.33□□□□□ -0.6
CSDE1-217ENST00000534699 E2F7Q96AV8 911 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 REEP2Q9BRK0 252 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 STRA6Q9BX79 667 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 GPR88Q9GZN0 384 aa11.33□□□□□ -0.6
CSDE1-217ENST00000534699 RPF1Q9H9Y2 349 aaKnown RBP11.33□□□□□ -0.6
CSDE1-217ENST00000534699 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms