RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 EMC7Q9NPA0 242 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 UCKL1Q9NWZ5 548 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.54□□□□□ -1.84
CSDE1-216ENST00000534389 MBD1Q9UIS9 605 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-216ENST00000534389 BLOC1S6Q9UL45 172 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 G3BP2Q9UN86 482 aaKnown RBP3.54□□□□□ -1.84
CSDE1-216ENST00000534389 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.54□□□□□ -1.84
CSDE1-216ENST00000534389 ATP6V1DQ9Y5K8 247 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 ABCA6Q8N139 1617 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 GLI2P10070 1586 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 TTC37Q6PGP7 1564 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 TOPBP1Q92547 1522 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 DUOX2Q9NRD8 1548 aa3.54□□□□□ -1.84
CSDE1-216ENST00000534389 CDK12Q9NYV4 1490 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-216ENST00000534389 PLCH2O75038 1416 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ZC3H13Q5T200 1668 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 RPGRIP1LQ68CZ1 1315 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 MYOCOSA0A1B0GUC4 107 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 A0A1B0GVL5 298 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 DNM1LO00429 736 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 CYP27B1O15528 508 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ZSCAN9O15535 394 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PFKFB2O60825 505 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PPFIA2O75334 1257 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 WDHD1O75717 1129 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 EIF3JO75822 258 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 RPSAP08865 295 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 EIF2S2P20042 333 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PTX3P26022 381 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 CDC25CP30307 473 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 GCKP35557 465 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 MAGEA8P43361 318 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 MECP2P51608 486 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 EPHA5P54756 1037 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 NAP1L1P55209 391 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 SESN3P58005 492 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 HERVK_113P62684 666 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 GNGT1P63211 74 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ZBED6P86452 979 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 AMPD3Q01432 767 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PFKPQ01813 784 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 SLC6A3Q01959 620 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ROM1Q03395 351 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 DBPQ10586 325 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PPFIA1Q13136 1202 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 BYSLQ13895 437 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PDIA5Q14554 519 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 RBBP5Q15291 538 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 CLUL1Q15846 466 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 DPCR1Q3MIW9 517 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 WDR72Q3MJ13 1102 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 CCDC40Q4G0X9 1142 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 TTC38Q5R3I4 469 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 HHATQ5VTY9 493 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 BROXQ5VW32 411 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 CIAPIN1Q6FI81 312 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 MIS18BP1Q6P0N0 1132 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 TRMT10BQ6PF06 316 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 Q6ZUG5 572 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ESPNLQ6ZVH7 1005 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 OTOP1Q7RTM1 612 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 OTOP2Q7RTS6 562 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 B3GNT8Q7Z7M8 397 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 MIB1Q86YT6 1006 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PHYKPLQ8IUZ5 450 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 VSTM4Q8IW00 320 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 RPAP2Q8IXW5 612 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 TTLL6Q8N841 843 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 CPA5Q8WXQ8 436 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ARL8AQ96BM9 186 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 STAMBPL1Q96FJ0 436 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 AHCYL2Q96HN2 611 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 CFAP53Q96M91 514 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PWWP2AQ96N64 755 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ZNF570Q96NI8 536 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PLEKHG4BQ96PX9 1271 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 DESI2Q9BSY9 194 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 API5Q9BZZ5 524 aaKnown RBP3.53□□□□□ -1.84
CSDE1-216ENST00000534389 MAF1Q9H063 256 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 VIPAS39Q9H9C1 493 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 TMEM165Q9HC07 324 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 POLD4Q9HCU8 107 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 INCENPQ9NQS7 918 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 HAUS2Q9NVX0 235 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 ANO10Q9NW15 660 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 MSRAQ9UJ68 235 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 CDC23Q9UJX2 597 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 RCOR1Q9UKL0 485 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 SYNPO2Q9UMS6 1093 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 PCDHA5Q9Y5H7 936 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 SPO11Q9Y5K1 396 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 B3GALT1Q9Y5Z6 326 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 UNC13BO14795 1591 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 IFT140Q96RY7 1462 aa3.53□□□□□ -1.84
CSDE1-216ENST00000534389 SETD1AO15047 1707 aaKnown RBP3.53□□□□□ -1.85
CSDE1-216ENST00000534389 USP32Q8NFA0 1604 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 ADGRB1O14514 1584 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 A0A1B0GUA9 196 aa3.52□□□□□ -1.85
CSDE1-216ENST00000534389 GOLGA8AA7E2F4 631 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms