RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 RHOBTB2Q9BYZ6 727 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 HAPLN2Q9GZV7 340 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 MAN1C1Q9NR34 630 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 TOPORSQ9NS56 1045 aaPredicted RBP15.4■□□□□ 0.06
SF3B2-215ENST00000534307 NR2E1Q9Y466 385 aa15.4■□□□□ 0.06
SF3B2-215ENST00000534307 MYH15Q9Y2K3 1946 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 C2CD4DB7Z1M9 353 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 STX6O43752 255 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 GLUD1P00367 558 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 KCNE1P15382 129 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 SP100P23497 879 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-215ENST00000534307 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-215ENST00000534307 CLCNKBP51801 687 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 OSTNP61366 133 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 MCL1Q07820 350 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 SIGLEC14Q08ET2 396 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 STRN3Q13033 797 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 NOLC1Q14978 699 aaKnown RBP eCLIP15.39■□□□□ 0.05
SF3B2-215ENST00000534307 PTPN21Q16825 1174 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 SPECC1Q5M775 1068 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 ATAT1Q5SQI0 421 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 FAM171A1Q5VUB5 890 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 HAUS6Q7Z4H7 955 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 C3orf58Q8NDZ4 430 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 LNX1Q8TBB1 728 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-215ENST00000534307 HDAC7Q8WUI4 952 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 LARP4BQ92615 738 aaKnown RBP15.39■□□□□ 0.05
SF3B2-215ENST00000534307 ATOH1Q92858 354 aaPredicted RBP15.39■□□□□ 0.05
SF3B2-215ENST00000534307 UROC1Q96N76 676 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 USP28Q96RU2 1077 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 CLSTN3Q9BQT9 956 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 TTPALQ9BTX7 342 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 GOLGA2P5Q9HBQ8 144 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 CNTN3Q9P232 1028 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 USTQ9Y2C2 406 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 EPG5Q9HCE0 2579 aa15.39■□□□□ 0.05
SF3B2-215ENST00000534307 EP300Q09472 2414 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-215ENST00000534307 H0YCG3 227 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 TGM5O43548 720 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 PIGRP01833 764 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 RPL17P18621 184 aaKnown RBP15.38■□□□□ 0.05
SF3B2-215ENST00000534307 SCP2P22307 547 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 DDIT3P35638 169 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 YARSP54577 528 aaKnown RBP15.38■□□□□ 0.05
SF3B2-215ENST00000534307 CREMQ03060 361 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 PRSS55Q6UWB4 352 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-215ENST00000534307 ZNF707Q96C28 371 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-215ENST00000534307 CLIC6Q96NY7 704 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 ACAP3Q96P50 834 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 TCHPQ9BT92 498 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 ZSCAN16Q9H4T2 348 aaPredicted RBP15.38■□□□□ 0.05
SF3B2-215ENST00000534307 PARVGQ9HBI0 331 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 TSHZ2Q9NRE2 1034 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 ANKFY1Q9P2R3 1169 aa15.38■□□□□ 0.05
SF3B2-215ENST00000534307 PROB1E7EW31 1015 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 FAM189A1O60320 539 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 RFPL2O75678 378 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 B3GAT3O94766 335 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 FGFR3P22607 806 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 NASPP49321 788 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-215ENST00000534307 ELAVL2Q12926 359 aaKnown RBP15.37■□□□□ 0.05
SF3B2-215ENST00000534307 DHX8Q14562 1220 aaKnown RBP15.37■□□□□ 0.05
SF3B2-215ENST00000534307 SLC39A14Q15043 492 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 SLC10A6Q3KNW5 377 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 DCLRE1AQ6PJP8 1040 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 CYP26C1Q6V0L0 522 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.37■□□□□ 0.05
SF3B2-215ENST00000534307 ASCL5Q7RTU5 278 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 PALB2Q86YC2 1186 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 ZDHHC14Q8IZN3 488 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 PLEKHA4Q9H4M7 779 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 SLC38A7Q9NVC3 462 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 DPP7Q9UHL4 492 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 TBX20Q9UMR3 447 aa15.37■□□□□ 0.05
SF3B2-215ENST00000534307 CCDC195A0A1B0GUA6 201 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 H0Y858 1186 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 CLDN3O15551 220 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 ADAM12O43184 909 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 FAM13AO94988 1023 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 SPATA31D3P0C874 917 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 HARSP12081 509 aaKnown RBP15.36■□□□□ 0.05
SF3B2-215ENST00000534307 AVPR2P30518 371 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 CEBPZQ03701 1054 aaKnown RBP15.36■□□□□ 0.05
SF3B2-215ENST00000534307 PSMD5Q16401 504 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 SEZ6Q53EL9 994 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 SLC39A4Q6P5W5 647 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 SPATA31D4Q6ZUB0 917 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 GLYCTKQ8IVS8 523 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 MYCT1Q8N699 235 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 TDRD5Q8NAT2 981 aaKnown RBP15.36■□□□□ 0.05
SF3B2-215ENST00000534307 RASSF8Q8NHQ8 419 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 C18orf25Q96B23 403 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-215ENST00000534307 DDX27Q96GQ7 796 aaKnown RBP15.36■□□□□ 0.05
SF3B2-215ENST00000534307 ST6GALNAC4Q9H4F1 302 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 MTRRQ9UBK8 725 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 STK17AQ9UEE5 414 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 NCOR2Q9Y618 2525 aa15.36■□□□□ 0.05
SF3B2-215ENST00000534307 A0A087X0B3 334 aa15.35■□□□□ 0.05
SF3B2-215ENST00000534307 TTC26A0AVF1 554 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms