RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 IPPQ9Y573 584 aa11.83□□□□□ -0.52
CSDE1-215ENST00000533818 PTPN13Q12923 2485 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 APBB3O95704 486 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 FTH1P19P0C7X4 201 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 MX1P20591 662 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 PRKCEQ02156 737 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 FCHO2Q0JRZ9 810 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 HSP90AA2PQ14568 343 aaPredicted RBP11.82□□□□□ -0.52
CSDE1-215ENST00000533818 IMMTQ16891 758 aaKnown RBP11.82□□□□□ -0.52
CSDE1-215ENST00000533818 USP39Q53GS9 565 aaKnown RBP11.82□□□□□ -0.52
CSDE1-215ENST00000533818 NIPA1Q7RTP0 329 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 PLA2G4DQ86XP0 818 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 RSPRY1Q96DX4 576 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 PGBD1Q96JS3 809 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 PRORYQ9H606 182 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 SENP2Q9HC62 589 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 TBC1D22BQ9NU19 505 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 SNTG2Q9NY99 539 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 CACNG4Q9UBN1 327 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 EBF1Q9UH73 591 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 HES2Q9Y543 173 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 PCDHB9Q9Y5E1 797 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 MYO9AB2RTY4 2548 aa11.82□□□□□ -0.52
CSDE1-215ENST00000533818 ARHGEF37A1IGU5 675 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 PRRG1O14668 218 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 IFIT3O14879 490 aaKnown RBP11.81□□□□□ -0.52
CSDE1-215ENST00000533818 WISP1O95388 367 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 ELF1P32519 619 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 DGKEP52429 567 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 GRSF1Q12849 480 aaKnown RBP eCLIP11.81□□□□□ -0.52
CSDE1-215ENST00000533818 TARBP2Q15633 366 aaKnown RBP11.81□□□□□ -0.52
CSDE1-215ENST00000533818 HAUS6Q7Z4H7 955 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 CATIPQ7Z7H3 387 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 ZFYVE19Q96K21 471 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 ZNF577Q9BSK1 485 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 GTPBP2Q9BX10 602 aaKnown RBP11.81□□□□□ -0.52
CSDE1-215ENST00000533818 SLITRK6Q9H5Y7 841 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 IFT122Q9HBG6 1241 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 CDY1Q9Y6F8 540 aa11.81□□□□□ -0.52
CSDE1-215ENST00000533818 COL12A1Q99715 3063 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 ERICH2A1L162 156 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 TRABD2BA6NFA1 517 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 OPHN1O60890 802 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 CD59P13987 128 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 GJA1P17302 382 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 ITPKBP27987 946 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 SMARCA1P28370 1054 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 MAPK6Q16659 721 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 MTERF2Q49AM1 385 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 CAMK1GQ96NX5 476 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 PAAF1Q9BRP4 392 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 EIF2AQ9BY44 585 aaKnown RBP11.8□□□□□ -0.52
CSDE1-215ENST00000533818 APOBEC2Q9Y235 224 aaKnown RBP11.8□□□□□ -0.52
CSDE1-215ENST00000533818 GIT1Q9Y2X7 761 aa11.8□□□□□ -0.52
CSDE1-215ENST00000533818 IGKV6-21A0A0C4DH24 114 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 FAM86B1E9PN63 330 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 RNF40O75150 1001 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 MOSPD3O75425 235 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 FOSP01100 380 aaPredicted RBP11.79□□□□□ -0.52
CSDE1-215ENST00000533818 CFIP05156 583 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 FAM86B2P0C5J1 330 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 MYL4P12829 197 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 BCKDHBP21953 392 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 TNK2Q07912 1038 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 ELAVL2Q12926 359 aaKnown RBP11.79□□□□□ -0.52
CSDE1-215ENST00000533818 GRIK3Q13003 919 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 ARHGAP29Q52LW3 1261 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 TMEM196Q5HYL7 178 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 IQCEQ6IPM2 695 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 FSTL4Q6MZW2 842 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 SLC23A3Q6PIS1 610 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 SYT12Q8IV01 421 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 ABCA7Q8IZY2 2146 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 FAM181AQ8N9Y4 354 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 GSTCDQ8NEC7 633 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 FCRL3Q96P31 734 aaPredicted RBP11.79□□□□□ -0.52
CSDE1-215ENST00000533818 ANO3Q9BYT9 981 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 GPR88Q9GZN0 384 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
CSDE1-215ENST00000533818 TMEM74BQ9NUR3 256 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 MTRRQ9UBK8 725 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 SEPT9Q9UHD8 586 aaPredicted RBP11.79□□□□□ -0.52
CSDE1-215ENST00000533818 EML5Q05BV3 1969 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 NUP205Q92621 2012 aa11.79□□□□□ -0.52
CSDE1-215ENST00000533818 hCG_1642624A0A1W2PR95 340 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 WDR64B1ANS9 1081 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 SH3BP5O60239 455 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 KIF4AO95239 1232 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 SREBF1P36956 1147 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 GFPT1Q06210 699 aaPredicted RBP11.78□□□□□ -0.52
CSDE1-215ENST00000533818 TEAD2Q15562 447 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 UGCGQ16739 394 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 ITPRIPL2Q3MIP1 535 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 TOGARAM2Q6ZUX3 1019 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 SYT13Q7L8C5 426 aa11.78□□□□□ -0.52
CSDE1-215ENST00000533818 SRGAP1Q7Z6B7 1085 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms