RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SOX4Q06945 474 aaPredicted RBP33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 ATAT1Q5SQI0 421 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 TMC5Q6UXY8 1006 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 POMKQ9H5K3 350 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 MAN1C1Q9NR34 630 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 DPP7Q9UHL4 492 aa33.09■■■□□ 2.89
SSSCA1-207ENST00000533115 A0A087X0B3 334 aa33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 C1RP00736 705 aa33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 IGFBP6P24592 240 aaPredicted RBP33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 SLC10A6Q3KNW5 377 aa33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 PRSS55Q6UWB4 352 aaPredicted RBP33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 CEP57Q86XR8 500 aa33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 DDX27Q96GQ7 796 aaKnown RBP33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 ST6GALNAC4Q9H4F1 302 aa33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 MUTYHQ9UIF7 546 aa33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 PLXNA3P51805 1871 aa33.08■■■□□ 2.89
SSSCA1-207ENST00000533115 GPR37L1O60883 481 aa33.07■■■□□ 2.88
SSSCA1-207ENST00000533115 RPL17P18621 184 aaKnown RBP33.07■■■□□ 2.88
SSSCA1-207ENST00000533115 TMEM31Q5JXX7 168 aa33.07■■■□□ 2.88
SSSCA1-207ENST00000533115 ELMSAN1Q6PJG2 1045 aa33.07■■■□□ 2.88
SSSCA1-207ENST00000533115 CD300LGQ6UXG3 332 aa33.07■■■□□ 2.88
SSSCA1-207ENST00000533115 PALB2Q86YC2 1186 aa33.07■■■□□ 2.88
SSSCA1-207ENST00000533115 MAP4K3Q8IVH8 894 aa33.07■■■□□ 2.88
SSSCA1-207ENST00000533115 PIK3R5Q8WYR1 880 aa33.07■■■□□ 2.88
SSSCA1-207ENST00000533115 CLTAP09496 248 aa33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 PKP1Q13835 747 aa33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 FOXD4L6Q3SYB3 417 aaPredicted RBP33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 HERC4Q5GLZ8 1057 aaPredicted RBP33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 FOXD4L3Q6VB84 417 aaPredicted RBP33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 PDZRN4Q6ZMN7 1036 aaPredicted RBP33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 GPR149Q86SP6 731 aa33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 SFR1Q86XK3 245 aa33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 GLYCTKQ8IVS8 523 aa33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 LNX1Q8TBB1 728 aaPredicted RBP33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 DNAJC19Q96DA6 116 aa33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 C11orf16Q9NQ32 467 aa33.06■■■□□ 2.88
SSSCA1-207ENST00000533115 KYAT1Q16773 422 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 ZC2HC1CQ53FD0 456 aaPredicted RBP33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 PDXDC1Q6P996 788 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 ZNF720Q7Z2F6 126 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 PDILTQ8N807 584 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 C3orf58Q8NDZ4 430 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 FEZF2Q8TBJ5 459 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 HDAC7Q8WUI4 952 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 C18orf25Q96B23 403 aaPredicted RBP33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 PLEKHA5Q9HAU0 1116 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 SEL1LQ9UBV2 794 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 NR2E1Q9Y466 385 aa33.05■■■□□ 2.88
SSSCA1-207ENST00000533115 PODXLO00592 558 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 TGM5O43548 720 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 TRAPPC3O43617 180 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 CUTAO60888 179 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 CXCL8P10145 99 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 GAP43P17677 238 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 FGFR3P22607 806 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 SP100P23497 879 aaPredicted RBP33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 PSMD5Q16401 504 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 CMASQ8NFW8 434 aaPredicted RBP33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 LRFN3Q9BTN0 628 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 TSHZ2Q9NRE2 1034 aa33.04■■■□□ 2.88
SSSCA1-207ENST00000533115 FAM86C2PA6NEL3 165 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 OGTO15294 1046 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 SPATA31D3P0C874 917 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 RPL9P32969 192 aaKnown RBP33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 TNFSF9P41273 254 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 SLC39A4Q6P5W5 647 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 LILRA6Q6PI73 481 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 C15orf39Q6ZRI6 1047 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 SPATA31D4Q6ZUB0 917 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 CLSTN3Q9BQT9 956 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 PLEKHA4Q9H4M7 779 aa33.03■■■□□ 2.88
SSSCA1-207ENST00000533115 VWA8A3KMH1 1905 aa33.02■■■□□ 2.88
SSSCA1-207ENST00000533115 A0A0B4J269 797 aa33.02■■■□□ 2.88
SSSCA1-207ENST00000533115 TTC26A0AVF1 554 aa33.02■■■□□ 2.88
SSSCA1-207ENST00000533115 FAM189A1O60320 539 aa33.02■■■□□ 2.88
SSSCA1-207ENST00000533115 MYBP10242 640 aa33.02■■■□□ 2.88
SSSCA1-207ENST00000533115 ATL3Q6DD88 541 aa33.02■■■□□ 2.88
SSSCA1-207ENST00000533115 MSTO1Q9BUK6 570 aa33.02■■■□□ 2.88
SSSCA1-207ENST00000533115 BRCC3P46736 316 aa33.01■■■□□ 2.87
SSSCA1-207ENST00000533115 ZBTB41Q5SVQ8 909 aa33.01■■■□□ 2.87
SSSCA1-207ENST00000533115 KCNG4Q8TDN1 519 aa33.01■■■□□ 2.87
SSSCA1-207ENST00000533115 HVCN1Q96D96 273 aa33.01■■■□□ 2.87
SSSCA1-207ENST00000533115 MRPL44Q9H9J2 332 aaKnown RBP33.01■■■□□ 2.87
SSSCA1-207ENST00000533115 PDCD11Q14690 1871 aaKnown RBP33.01■■■□□ 2.87
SSSCA1-207ENST00000533115 CCDC195A0A1B0GUA6 201 aa33■■■□□ 2.87
SSSCA1-207ENST00000533115 ANKRD63C9JTQ0 380 aa33■■■□□ 2.87
SSSCA1-207ENST00000533115 I3L4J1 428 aa33■■■□□ 2.87
SSSCA1-207ENST00000533115 PPP2R3AQ06190 1150 aa33■■■□□ 2.87
SSSCA1-207ENST00000533115 SHC4Q6S5L8 630 aa33■■■□□ 2.87
SSSCA1-207ENST00000533115 KREMEN2Q8NCW0 462 aa33■■■□□ 2.87
SSSCA1-207ENST00000533115 STRA6Q9BX79 667 aa33■■■□□ 2.87
SSSCA1-207ENST00000533115 MTCL1Q9Y4B5 1905 aaKnown RBP33■■■□□ 2.87
SSSCA1-207ENST00000533115 C2CD4DB7Z1M9 353 aa32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 PPP1R37O75864 691 aa32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 IDEP14735 1019 aa32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 TKTP29401 623 aaKnown RBP32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 ENOX2Q16206 610 aaKnown RBP32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 E2F4Q16254 413 aa32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 AXDND1Q5T1B0 1012 aaPredicted RBP32.99■■■□□ 2.87
SSSCA1-207ENST00000533115 CYP26C1Q6V0L0 522 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms