RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 CEP135Q66GS9 1140 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TMEM173Q86WV6 379 aaPredicted RBP12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 NELFBQ8WX92 580 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 RSPH1Q8WYR4 309 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 P2RX5Q93086 422 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DHTKD1Q96HY7 919 aaPredicted RBP12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FAM84AQ96KN4 292 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FBXL18Q96ME1 805 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ZNF558Q96NG5 402 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PCDHB12Q9Y5F1 795 aa12.95□□□□□ -0.34
TRAF3IP2-212ENST00000532708 NRP1O14786 923 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ALDH2P05091 517 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 NFICP08651 508 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 IGFBP6P24592 240 aaPredicted RBP12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CCNE1P24864 410 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 NLRP12P59046 1061 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ADAM9Q13443 819 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TUSC3Q13454 348 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SLC9A9Q8IVB4 645 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 BRSK2Q8IWQ3 736 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KLHL23Q8NBE8 558 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FBXO22Q8NEZ5 403 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PRDM12Q9H4Q4 367 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 KIAA1586Q9HCI6 787 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 AAASQ9NRG9 546 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FAN1Q9Y2M0 1017 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PRG3Q9Y2Y8 225 aaPredicted RBP12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 EYSQ5T1H1 3165 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CSPG5O95196 566 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 GUCY2FP51841 1108 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ZBTB6Q15916 424 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 GDPD5Q8WTR4 605 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TSG101Q99816 390 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ASB7Q9H672 318 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 RWDD3Q9Y3V2 267 aa12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
TRAF3IP2-212ENST00000532708 REV3LO60673 3130 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 C5orf67F2Z3F1 127 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 AKAP3O75969 853 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FGF18O76093 207 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 IL18RAPO95256 599 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 RPL13P26373 211 aaKnown RBP12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PPP1R2P41236 205 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CLCNKBP51801 687 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PAK1Q13153 545 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 GPM6BQ13491 265 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TMEM132DQ14C87 1099 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 EDRF1Q3B7T1 1238 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 LMBRD2Q68DH5 695 aaPredicted RBP12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CD302Q8IX05 232 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 EFCAB13Q8IY85 973 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DEFB123Q8N688 67 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 MLKLQ8NB16 471 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 HASPINQ8TF76 798 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 BCL7CQ8WUZ0 217 aaPredicted RBP12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SYAP1Q96A49 352 aaPredicted RBP12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CCDC127Q96BQ5 260 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SAMD11Q96NU1 681 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 POP1Q99575 1024 aaKnown RBP12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SPG21Q9NZD8 308 aa12.93□□□□□ -0.34
TRAF3IP2-212ENST00000532708 ITGB1P05556 798 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DLATP10515 647 aaKnown RBP12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TFAMQ00059 246 aaKnown RBP12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 POU5F1Q01860 360 aaKnown RBP12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 LRRC63Q05C16 580 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CYP24A1Q07973 514 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 MYBPC2Q14324 1141 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 NFIL3Q16649 462 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TTI2Q6NXR4 508 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SASS6Q6UVJ0 657 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SLC39A11Q8N1S5 342 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TMEM174Q8WUU8 243 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 DUSP9Q99956 384 aaKnown RBP12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 TMEM175Q9BSA9 504 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PLVAPQ9BX97 442 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SLC38A7Q9NVC3 462 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FRMD4BQ9Y2L6 1034 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PTPRJQ12913 1337 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PLXNA4Q9HCM2 1894 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 H3BNC9 293 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 CETN3O15182 167 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 GRM6O15303 877 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 RB1P06400 928 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 FKBP3Q00688 224 aaKnown RBP12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 UPP1Q16831 310 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 SCARA3Q6AZY7 606 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 PLEKHO2Q8TD55 490 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 IGSF21Q96ID5 467 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 MFSD14AQ96MC6 490 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 MED15Q96RN5 788 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 C11orf84Q9BUA3 381 aaPredicted RBP12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 MARCH5Q9NX47 278 aa12.92□□□□□ -0.34
TRAF3IP2-212ENST00000532708 UBQLN1Q9UMX0 589 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms