RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 FAM86B2P0C5J1 330 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 KPNA2P52292 529 aaKnown RBP16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 MYBPC2Q14324 1141 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 DACT2Q5SW24 774 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 IER5Q5VY09 327 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 HEATR6Q6AI08 1181 aaKnown RBP16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 ZNF571Q7Z3V5 609 aaPredicted RBP16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 FAM83AQ86UY5 434 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 OR2W6PQ8NHA6 318 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 LTN1O94822 1766 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 HIF1AQ16665 826 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 EPC2Q52LR7 807 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 NUF2Q9BZD4 464 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 CDH16O75309 829 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 SLC25A27O95847 323 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 KCNJ1P48048 391 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 PIGHQ14442 188 aaPredicted RBP16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 EZH2Q15910 746 aaKnown RBP16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 KCNK18Q7Z418 384 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 EPN3Q9H201 632 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 DHX35Q9H5Z1 703 aaKnown RBP16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 INTS13Q9NVM9 706 aa16.21■□□□□ 0.19
PCDHA3-202ENST00000532566 A0A0G2JND7 137 aa16.21■□□□□ 0.18
PCDHA3-202ENST00000532566 ASAP2O43150 1006 aa16.21■□□□□ 0.18
PCDHA3-202ENST00000532566 FUT2Q10981 343 aa16.21■□□□□ 0.18
PCDHA3-202ENST00000532566 ZNF560Q96MR9 790 aa16.21■□□□□ 0.18
PCDHA3-202ENST00000532566 NIF3L1Q9GZT8 377 aa16.21■□□□□ 0.18
PCDHA3-202ENST00000532566 SENP1Q9P0U3 644 aa16.21■□□□□ 0.18
PCDHA3-202ENST00000532566 CHORDC1Q9UHD1 332 aaPredicted RBP16.21■□□□□ 0.18
PCDHA3-202ENST00000532566 VGLL3A8MV65 326 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 F8VZ95 297 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 MAGEB2O15479 319 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 FGRP09769 529 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 NPTX2P47972 431 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 RBP5P82980 135 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 AGBL2Q5U5Z8 902 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 ZC3H18Q86VM9 953 aaKnown RBP16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 MCEEQ96PE7 176 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 RBM15Q96T37 977 aaKnown RBP eCLIP16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 AIPL1Q9NZN9 384 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 GOLGA8QA0A0J9YX86 632 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 GOLGA8OA6NCC3 632 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 GOLGA8NF8WBI6 632 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 BACE1P56817 501 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 EIF3EP60228 445 aaKnown RBP16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 MEA1Q16626 185 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 CRLF3Q8IUI8 442 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 ZNF507Q8TCN5 953 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 ZKSCAN4Q969J2 545 aaPredicted RBP16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 PDCD2LQ9BRP1 358 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 CPSF3Q9UKF6 684 aaKnown RBP16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 HSPA9P38646 679 aaKnown RBP16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 CXCL9Q07325 125 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 STILQ15468 1287 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 PCNX4Q63HM2 1172 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 SPOPLQ6IQ16 392 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 CDKL3Q8IVW4 592 aaPredicted RBP16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 C4orf19Q8IY42 314 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 SYTL5Q8TDW5 730 aaPredicted RBP16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 MTMR8Q96EF0 704 aa16.2■□□□□ 0.18
PCDHA3-202ENST00000532566 ADORA2BP29275 332 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 IRAK1P51617 712 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 CDR2Q01850 454 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 WDR75Q8IWA0 830 aaKnown RBP16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 C9orf72Q96LT7 481 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 CCT8L2Q96SF2 557 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 ZSWIM1Q9BR11 485 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 LUC7L3O95232 432 aaKnown RBP16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 SERPINB6P35237 376 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 MMEL1Q495T6 779 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 ATF7IP2Q5U623 682 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 ACAD10Q6JQN1 1059 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 RWDD4Q6NW29 188 aaKnown RBP16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 SLC13A5Q86YT5 568 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 LRRC71Q8N4P6 559 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 NRXN3Q9Y4C0 1643 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 PDGFRAP16234 1089 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 TAL1P17542 331 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 P3H1Q32P28 736 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 NBPF9Q3BBW0 867 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 ZFPM1Q8IX07 1006 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 SCFD2Q8WU76 684 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 NUDCD1Q96RS6 583 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 ANKZF1Q9H8Y5 726 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 KLRC4O43908 158 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 GZMAP12544 262 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 EVX2Q03828 476 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 SEPT6Q14141 434 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 TMEM132DQ14C87 1099 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 LRRN4CLQ8ND94 238 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 FOXP3Q9BZS1 431 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 PRMT7Q9NVM4 692 aaPredicted RBP16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 SNX9Q9Y5X1 595 aa16.19■□□□□ 0.18
PCDHA3-202ENST00000532566 VCAM1P19320 739 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 GARTP22102 1010 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 LSP1P33241 339 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 SLC30A10Q6XR72 485 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 OTOP1Q7RTM1 612 aa16.18■□□□□ 0.18
PCDHA3-202ENST00000532566 MCUQ8NE86 351 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms