RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 ZNF184Q99676 751 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 HAUS8Q9BT25 410 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 CNGB3Q9NQW8 809 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 AGPAT5Q9NUQ2 364 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 ARMCX3Q9UH62 379 aaPredicted RBP7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 NOD1Q9Y239 953 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 TMA7Q9Y2S6 64 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 GDAQ9Y2T3 454 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 MRPL11Q9Y3B7 192 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 PCDHB6Q9Y5E3 794 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 ABCB11O95342 1321 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 A0A0G2JND7 137 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM43BA6NCK2 446 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 NFIBO00712 420 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 TJP3O95049 919 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 LCA5LO95447 670 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 ABL1P00519 1130 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 FGGP02679 453 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 TROAPQ12815 778 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 MYBPC3Q14896 1274 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 THOC7Q6I9Y2 204 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 USP38Q8NB14 1042 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 DDHD1Q8NEL9 900 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 SPATA17Q96L03 361 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM55Q9BYV6 548 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 UBE2OQ9C0C9 1292 aaKnown RBP7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 PIDD1Q9HB75 910 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 EURLQ9NYK6 297 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 GMEB1Q9Y692 573 aa7.2□□□□□ -1.26
TGFBR3-209ENST00000532540 SMIM31A0A1B0GVY4 71 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 A6NHS1 94 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 A8MUI8 341 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 ZBTB5O15062 677 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 SERPING1P05155 500 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 VAV1P15498 845 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 HSPA6P17066 643 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 PSMC1P62191 440 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 GFPT1Q06210 699 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 TRPC3Q13507 836 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 TMED2Q15363 201 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 MAN2A1Q16706 1144 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 IZUMO2Q6UXV1 221 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 B3GNT6Q6ZMB0 384 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 DYMQ7RTS9 669 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 FAM186BQ8IYM0 893 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 LRRC43Q8N309 656 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 USP33Q8TEY7 942 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 PPP2R3CQ969Q6 453 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 DNAJC7Q99615 494 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 CCDC28BQ9BUN5 200 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 NRDE2Q9H7Z3 1164 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 JMJD4Q9H9V9 463 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 ANLNQ9NQW6 1124 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 ADAMTS1Q9UHI8 967 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 NOC2LQ9Y3T9 749 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 SLX4Q8IY92 1834 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 PITPNM2Q9BZ72 1349 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM49BA6NDI0 452 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 WDR46O15213 610 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 TTI1O43156 1089 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 IFNAR1P17181 557 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 CCNE1P24864 410 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 EIF2B2P49770 351 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 ERFP50548 548 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 CCNA1P78396 465 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 BTKQ06187 659 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 KRT81Q14533 505 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 UAP1Q16222 522 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 LRRC36Q1X8D7 754 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 LIN52Q52LA3 116 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 KRT80Q6KB66 452 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 LRRC8BQ6P9F7 803 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 NCCRP1Q6ZVX7 275 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 EPM2AIP1Q7L775 607 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 U2AF1L4Q8WU68 220 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 FERMT1Q9BQL6 677 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 SYT15Q9BQS2 421 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 CLIC5Q9NZA1 410 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 DCTN4Q9UJW0 460 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 DBR1Q9UK59 544 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 NHSQ6T4R5 1651 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 C5orf60A6NFR6 353 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 TMEM88BA6NKF7 163 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 PODXLO00592 558 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 UNC5CO95185 931 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 ESRRBO95718 433 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 PTGDRQ13258 359 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 THOC5Q13769 683 aaKnown RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 RGMBQ6NW40 437 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 RGS9BPQ6ZS82 235 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 CCNJLQ8IV13 435 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 RIBC1Q8N443 379 aaPredicted RBP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 METTL13Q8N6R0 699 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 PAF1Q8N7H5 531 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 STKLD1Q8NE28 680 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 CAPNS2Q96L46 248 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 TSPAN18Q96SJ8 248 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 ZIC5Q96T25 663 aa7.19□□□□□ -1.26
TGFBR3-209ENST00000532540 DDX50Q9BQ39 737 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms