RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PRRT2Q7Z6L0 340 aaPredicted RBP16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 UBN1Q9NPG3 1134 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 CYB561D2O14569 222 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 PFDN6O15212 129 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 ALDH2P05091 517 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 SNRPFP62306 86 aaKnown RBP16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 TRIM72Q6ZMU5 477 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 LENG1Q96BZ8 264 aaPredicted RBP16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 PNMA5Q96PV4 448 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 CA12O43570 354 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 ECEL1O95672 775 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 KRT3P12035 628 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.262e-7■■■■■ 34.3
PPFIA1-222ENST00000532504 PRKCZQ05513 592 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 MMS22LQ6ZRQ5 1243 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 STK33Q9BYT3 514 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 IPO11Q9UI26 975 aaKnown RBP16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 MOSPD1Q9UJG1 213 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 PIK3CDO00329 1044 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 ENGASEQ8NFI3 743 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 MKNK1Q9BUB5 465 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 PCDHB12Q9Y5F1 795 aa16.7■□□□□ 0.26
PPFIA1-222ENST00000532504 PPP1R3GB7ZBB8 358 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 SART1O43290 800 aaKnown RBP16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 FGRP09769 529 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 BRD2P25440 801 aaKnown RBP16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 CTXN3Q4LDR2 81 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 ARFGAP2Q8N6H7 521 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 KLHL8Q9P2G9 620 aaPredicted RBP16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 NAGPAQ9UK23 515 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 FGGP02679 453 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 GTF2H1P32780 548 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 KLK7P49862 253 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 SULT1E1P49888 294 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 GOLGA7BQ2TAP0 167 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 JRKLQ9Y4A0 524 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 DAAM1Q9Y4D1 1078 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 NRCAMQ92823 1304 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 ZMYND10O75800 440 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 PHBP35232 272 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 ZNF211Q13398 564 aaPredicted RBP16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 BHMTQ93088 406 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 EIF3CLB5ME19 914 aaKnown RBP16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 CPLX4Q7Z7G2 160 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 C7orf43Q8WVR3 580 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 EIF3CQ99613 913 aaKnown RBP16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 AGPAT5Q9NUQ2 364 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 DONSONQ9NYP3 566 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 HDAC6Q9UBN7 1215 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
PPFIA1-222ENST00000532504 A0A1W2PQC6 194 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 EVI5O60447 810 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 PPP1R11O60927 126 aaPredicted RBP16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 PDGFRAP16234 1089 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 SCP2P22307 547 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 CLEC17AQ6ZS10 378 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 RABGGTAQ92696 567 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 LSM7Q9UK45 103 aaKnown RBP16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 ALDH3A1P30838 453 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 CTNNA1P35221 906 aaKnown RBP16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 PLTPP55058 493 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 GPAT2Q6NUI2 795 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 ACOT1Q86TX2 421 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 SCFD1Q8WVM8 642 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 RGPD2P0DJD1 1756 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 AMHP03971 560 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 PNMA6AP0CW24 399 aaPredicted RBP16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 HHATQ5VTY9 493 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 KRT222Q8N1A0 295 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 PARD3BQ8TEW8 1205 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 CDC23Q9UJX2 597 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 TLR2O60603 784 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 PSMD10O75832 226 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 VIMP08670 466 aaKnown RBP16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 C2orf54Q08AI8 447 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 IKBKEQ14164 716 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 ERCC6LQ2NKX8 1250 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 EFCAB13Q8IY85 973 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 ZBTB45Q96K62 511 aaPredicted RBP16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 PARVAQ9NVD7 372 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 IP6K2Q9UHH9 426 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
PPFIA1-222ENST00000532504 SPATA31C2B4DYI2 1134 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 SF3A3Q12874 501 aaKnown RBP eCLIP16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 STILQ15468 1287 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 SLC27A1Q6PCB7 646 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 CPP00450 1065 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 CYBBP04839 570 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 FAM200BP0CF97 657 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 CDH6P55285 790 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 MRPS25P82663 173 aaKnown RBP16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 HSDL1Q3SXM5 330 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 BZW1Q7L1Q6 419 aaKnown RBP16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 SLITRK1Q96PX8 696 aa16.67■□□□□ 0.26
PPFIA1-222ENST00000532504 KLHL11Q9NVR0 708 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms