RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 CHCHD3Q9NX63 227 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 IGSF9Q9P2J2 1179 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 SCAF8Q9UPN6 1271 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 MAN2B2Q9Y2E5 1009 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 USP15Q9Y4E8 981 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 TOP2AP11388 1531 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 HMX3A6NHT5 357 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 K7EPI3 171 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 M0QX08 132 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 MYO1FO00160 1098 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 SNRPA1P09661 255 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 SKILP12757 684 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 HOXD8P13378 290 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ITGA4P13612 1032 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 C6P13671 934 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 BRAFP15056 766 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 AOAHP28039 575 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ABCD3P28288 659 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 CST5P28325 142 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 SULT1E1P49888 294 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 SLC12A3P55017 1021 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 MAMLD1Q13495 774 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 CUL4BQ13620 913 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 SEC23AQ15436 765 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 PAN2Q504Q3 1202 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 CCDC157Q569K6 752 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 CAVIN4Q5BKX8 364 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ATPAF1Q5TC12 328 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 TAF2Q6P1X5 1199 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 SLC2A7Q6PXP3 512 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 DENND5BQ6ZUT9 1274 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ZFPM1Q8IX07 1006 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 DRAXINQ8NBI3 349 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ANKRD20A12PQ8NF67 263 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ANKK1Q8NFD2 765 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 THAP4Q8WY91 577 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ELMO3Q96BJ8 720 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 CFAP36Q96G28 342 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 MSLNLQ96KJ4 702 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 UIMC1Q96RL1 719 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ATP6V0BQ99437 205 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 TCHPQ9BT92 498 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 PBX4Q9BYU1 374 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 RASSF4Q9H2L5 321 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 ZMAT4Q9H898 229 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 N6AMT1Q9Y5N5 214 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 CYP46A1Q9Y6A2 500 aa5.7□□□□□ -1.5
ECHDC1-222ENST00000531967 A0A0U1RQK1 487 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ZNF320A2RRD8 509 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 RGSL1A5PLK6 1076 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ISM1B1AKI9 464 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 PSMA7O14818 248 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 HTRA2O43464 458 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 SASH1O94885 1247 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 NEFHP12036 1026 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 KRT2P35908 639 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ZNF41P51814 821 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 PLAURQ03405 335 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 AIMP1Q12904 312 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 EPS8Q12929 822 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 NFE2L1Q14494 772 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 POU4F3Q15319 338 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ZNF174Q15697 407 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 C2orf76Q3KRA6 126 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 DUSP28Q4G0W2 176 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 PPIL6Q8IXY8 311 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 OXR1Q8N573 874 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 TTC39CQ8N584 583 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 SEPT1Q8WYJ6 367 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 TEKT1Q969V4 418 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 RNF125Q96EQ8 232 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 MAP7D2Q96T17 732 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 BOCQ9BWV1 1114 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ZC3H12CQ9C0D7 883 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 MKRN2Q9H000 416 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 NT5C3AQ9H0P0 336 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 C1orf21Q9H246 121 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 NDST4Q9H3R1 872 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 RNPEPQ9H4A4 650 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 COPS7BQ9H9Q2 264 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 TM7SF3Q9NS93 570 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 PIAS3Q9Y6X2 628 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 GPR75-ASB3A0A0A6YYF3 556 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 PRAMEF27A3QJZ7 478 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 H3BNC9 293 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 TAF4O00268 1085 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 STX6O43752 255 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 SMPD2O60906 423 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 FTLP02792 175 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 OPN1MWP04001 364 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ITGA5P08648 1049 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 TMIGD3P0DMS9 266 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 OPN1MW2P0DN77 364 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 OPN1MW3P0DN78 364 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 RHOQP17081 205 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 SLC7A1P30825 629 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ARL3P36405 182 aa5.69□□□□□ -1.5
ECHDC1-222ENST00000531967 ASMTP46597 345 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms