RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 POFUT1Q9H488 388 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 ZNF277Q9NRM2 450 aaPredicted RBP5.54□□□□□ -1.52
USP47-211ENST00000531513 DNAJC28Q9NX36 388 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 PTGFRNQ9P2B2 879 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 KCNG1Q9UIX4 513 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 SYNPO2Q9UMS6 1093 aa5.54□□□□□ -1.52
USP47-211ENST00000531513 OPHN1O60890 802 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 RECQL4O94761 1208 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 APOL3O95236 402 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 GYPEP15421 78 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 AGXTP21549 392 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 ZNF280AP59817 542 aaPredicted RBP5.53□□□□□ -1.52
USP47-211ENST00000531513 FSCN1Q16658 493 aaKnown RBP5.53□□□□□ -1.52
USP47-211ENST00000531513 MORC1Q86VD1 984 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 FAM43AQ8N2R8 423 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 PPP1R14CQ8TAE6 165 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 BBC3Q96PG8 261 aaPredicted RBP5.53□□□□□ -1.52
USP47-211ENST00000531513 UIMC1Q96RL1 719 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 ELAC2Q9BQ52 826 aaKnown RBP5.53□□□□□ -1.52
USP47-211ENST00000531513 CPEB1Q9BZB8 566 aaKnown RBP5.53□□□□□ -1.52
USP47-211ENST00000531513 OSBPL6Q9BZF3 934 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 ENKD1Q9H0I2 346 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 TOR3AQ9H497 397 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 PRDM16Q9HAZ2 1276 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 ING3Q9NXR8 418 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 USP36Q9P275 1121 aaKnown RBP5.53□□□□□ -1.52
USP47-211ENST00000531513 MSRAQ9UJ68 235 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 INTUQ9ULD6 942 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 DNM3Q9UQ16 869 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 FAM50BQ9Y247 325 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 DAAM1Q9Y4D1 1078 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 GPR45Q9Y5Y3 372 aa5.53□□□□□ -1.52
USP47-211ENST00000531513 CENPVL1A0A0U1RR11 272 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 ZAR1LA6NP61 321 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 ELL2O00472 640 aaPredicted RBP5.52□□□□□ -1.53
USP47-211ENST00000531513 POU2F2P09086 479 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 GAAP10253 952 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 ENPP1P22413 925 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 MTNR1BP49286 362 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 USP14P54578 494 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 ADKP55263 362 aaKnown RBP5.52□□□□□ -1.53
USP47-211ENST00000531513 ATAT1Q5SQI0 421 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 Q6YL49 198 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 ADGRG3Q86Y34 549 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 MIER2Q8N344 545 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 HPS3Q969F9 1004 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 FAM193BQ96PV7 902 aaPredicted RBP5.52□□□□□ -1.53
USP47-211ENST00000531513 CPPED1Q9BRF8 314 aaPredicted RBP5.52□□□□□ -1.53
USP47-211ENST00000531513 NOL10Q9BSC4 688 aaKnown RBP5.52□□□□□ -1.53
USP47-211ENST00000531513 UBA5Q9GZZ9 404 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 KCNH6Q9H252 994 aa5.52□□□□□ -1.53
USP47-211ENST00000531513 EIF2B4Q9UI10 523 aaKnown RBP5.52□□□□□ -1.53
USP47-211ENST00000531513 AHRRA9YTQ3 701 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 MASP2O00187 686 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 NRP1O14786 923 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 MAFGO15525 162 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 HOXA3O43365 443 aaPredicted RBP5.51□□□□□ -1.53
USP47-211ENST00000531513 LPXNO60711 386 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 FSBPO95073 299 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 FOSP01100 380 aaPredicted RBP5.51□□□□□ -1.53
USP47-211ENST00000531513 LAG3P18627 525 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 C5AR1P21730 350 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 PAX3P23760 479 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 FAM189BP81408 668 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 SRSF2Q01130 221 aaKnown RBP5.51□□□□□ -1.53
USP47-211ENST00000531513 ZNF267Q14586 743 aaPredicted RBP5.51□□□□□ -1.53
USP47-211ENST00000531513 MAN2A1Q16706 1144 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 HSP90AB4PQ58FF6 505 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 TOR2AQ5JU69 321 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 LRCH2Q5VUJ6 765 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 OLFML1Q6UWY5 402 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 TOGARAM2Q6ZUX3 1019 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 SRGAP1Q7Z6B7 1085 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 CATIPQ7Z7H3 387 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 PIK3C3Q8NEB9 887 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 OR52N2Q8NGI0 321 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 SLC46A2Q9BY10 475 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 ANO3Q9BYT9 981 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 SYNPO2LQ9H987 977 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 PHTF1Q9UMS5 762 aa5.51□□□□□ -1.53
USP47-211ENST00000531513 MYPNQ86TC9 1320 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 COL4A3Q01955 1670 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 PMM2O15305 246 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 ALDH1A2O94788 518 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 HRGP04196 525 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 RHCEP18577 417 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 SERPINB3P29508 390 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 APOBEC3AP31941 199 aaPredicted RBP5.5□□□□□ -1.53
USP47-211ENST00000531513 C21orf58P58505 322 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 RHDQ02161 417 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 UGT8Q16880 541 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 GRAMD1BQ3KR37 738 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 CT83Q5H943 113 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 ZBTB41Q5SVQ8 909 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 KCNK18Q7Z418 384 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 GJA10Q969M2 543 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 EAF2Q96CJ1 260 aaPredicted RBP5.5□□□□□ -1.53
USP47-211ENST00000531513 ACO2Q99798 780 aaKnown RBP5.5□□□□□ -1.53
USP47-211ENST00000531513 PDCD2LQ9BRP1 358 aa5.5□□□□□ -1.53
USP47-211ENST00000531513 GTPBP4Q9BZE4 634 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms