RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 AXIN2Q9Y2T1 843 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 ATP6V0A2Q9Y487 856 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 SNX9Q9Y5X1 595 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 SLC12A7Q9Y666 1083 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 CEPT1Q9Y6K0 416 aa8.26□□□□□ -1.09
PTPRK-219ENST00000531050 MYH4Q9Y623 1939 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 C1orf167Q5SNV9 1468 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 ANKRD34BA5PLL1 514 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 SOBPA7XYQ1 873 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 CDH2P19022 906 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 MUTP22033 750 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 ATP5DP30049 168 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PTGIRP43119 386 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PHKA2P46019 1235 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 ERFP50548 548 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 AQP4P55087 323 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 ATP2C1P98194 919 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 FOXD4Q12950 439 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PTGDRQ13258 359 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 KYNUQ16719 465 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PLEKHG4Q58EX7 1191 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PPP2R2DQ66LE6 453 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PPP1R21Q6ZMI0 780 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 RGS9BPQ6ZS82 235 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 SLFN11Q7Z7L1 901 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 CCDC84Q86UT8 332 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 IFNLR1Q8IU57 520 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 ERI1Q8IV48 349 aaKnown RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 TPCN2Q8NHX9 752 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PTCD2Q8WV60 388 aaKnown RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 C7orf43Q8WVR3 580 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 SYN2Q92777 582 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 HPS3Q969F9 1004 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 SKA1Q96BD8 255 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 GPR101Q96P66 508 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 GPATCH1Q9BRR8 931 aaKnown RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 NUP85Q9BW27 656 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 TANGO6Q9C0B7 1094 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 ANKRD2Q9GZV1 360 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 VTA1Q9NP79 307 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 SLC38A7Q9NVC3 462 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PCDHB2Q9Y5E7 798 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PCDHA3Q9Y5H8 950 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 LOC105371267A0A1B0GV96 52 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 H3BSA7 217 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 HAUS5O94927 633 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 BMP15O95972 392 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 CD48P09326 243 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 OCM2P0CE71 109 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 OCMP0CE72 109 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 UBL4AP11441 157 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PGM1P36871 562 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 AP2B1P63010 937 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 KCNC4Q03721 635 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 MAPK7Q13164 816 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 TCIRG1Q13488 830 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 NR1D2Q14995 579 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 NAALADL2Q58DX5 795 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 RIPOR1Q6ZS17 1223 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 LRRC6Q86X45 466 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 NSL1Q96IY1 281 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 ZFRQ96KR1 1074 aaKnown RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PANX3Q96QZ0 392 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PLVAPQ9BX97 442 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 OSBPL6Q9BZF3 934 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 PARVBQ9HBI1 364 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 UBN1Q9NPG3 1134 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 DNAJC17Q9NVM6 304 aaKnown RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 ADAMTS1Q9UHI8 967 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 LZTS1Q9Y250 596 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 RBMX2Q9Y388 322 aaKnown RBP8.25□□□□□ -1.09
PTPRK-219ENST00000531050 IVNS1ABPQ9Y6Y0 642 aa8.25□□□□□ -1.09
PTPRK-219ENST00000531050 BICDL2A1A5D9 508 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 TTC34A8MYJ7 566 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ATMINO43313 823 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 CNOT3O75175 753 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 NOL4O94818 638 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 RARBP10826 455 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 HSD17B4P51659 736 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 KPNA1P52294 538 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 RPL26P61254 145 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 NOP14P78316 857 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 BTKQ06187 659 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ACAP1Q15027 740 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 PHKG1Q16816 387 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 MMEL1Q495T6 779 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 DCAF6Q58WW2 860 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 TMEM63BQ5T3F8 832 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 TMCO4Q5TGY1 634 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 DCLRE1AQ6PJP8 1040 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 POTEHQ6S545 545 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 RNF111Q6ZNA4 994 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 FASTKD5Q7L8L6 764 aaKnown RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 KRT28Q7Z3Y7 464 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 PEX26Q7Z412 305 aa8.24□□□□□ -1.09
PTPRK-219ENST00000531050 NET1Q7Z628 596 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-219ENST00000531050 ADGRG6Q86SQ4 1221 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms