RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SAMM50Q9Y512 469 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 PCDHA10Q9Y5I2 948 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 FHOD1Q9Y613 1164 aa6.04□□□□□ -1.44
PCF11-205ENST00000530906 V9GYY5 206 aaPredicted RBP6.04□□□□□ -1.44
PCF11-205ENST00000530906 PAPPA2Q9BXP8 1791 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 ASTN2O75129 1339 aaPredicted RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 WDR90Q96KV7 1748 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 SSC5DA1L4H1 1573 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 TLR2O60603 784 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 EXOC3O60645 756 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 ATP1A1P05023 1023 aaKnown RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 TGFB3P10600 412 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 EIF2AK2P19525 551 aaKnown RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 TNFRSF8P28908 595 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 NMT1P30419 496 aaKnown RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 SOX5P35711 763 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 MYL7Q01449 175 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 CYP27A1Q02318 531 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 PTK7Q13308 1070 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 DMP1Q13316 513 aaPredicted RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 TCEAL1Q15170 157 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 PPP2R5EQ16537 467 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 KIAA0753Q2KHM9 967 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 CFAP221Q4G0U5 840 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 TBC1D10BQ4KMP7 808 aaPredicted RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 CRTC2Q53ET0 693 aaPredicted RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 MUM1L1Q5H9M0 696 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 DCAF17Q5H9S7 520 aaPredicted RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 UTP14CQ5TAP6 766 aaKnown RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 CCDC181Q5TID7 509 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 ANGEL2Q5VTE6 544 aaKnown RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 SNRNP48Q6IEG0 339 aaKnown RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 DPY19L2P1Q6NXN4 242 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 NSMFQ6X4W1 530 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 SLC30A10Q6XR72 485 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 LBX2Q6XYB7 198 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 HDXQ7Z353 690 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 HAUS6Q7Z4H7 955 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 IRF2BP2Q7Z5L9 587 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 MAP4K3Q8IVH8 894 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 EXOC8Q8IYI6 725 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 DAW1Q8N136 415 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 LRRN4CLQ8ND94 238 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.03□□□□□ -1.44
PCF11-205ENST00000530906 IL31RAQ8NI17 732 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 GLMNQ92990 594 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 ATG4CQ96DT6 458 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 PBKQ96KB5 322 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 TAAR1Q96RJ0 339 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 ANKZF1Q9H8Y5 726 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 SIX2Q9NPC8 291 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 ZNF446Q9NWS9 450 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 ZFATQ9P243 1243 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 APEX2Q9UBZ4 518 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 NENFQ9UMX5 172 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 DIS3Q9Y2L1 958 aaKnown RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 COL11A1P12107 1806 aaPredicted RBP6.03□□□□□ -1.44
PCF11-205ENST00000530906 ARID2Q68CP9 1835 aa6.03□□□□□ -1.44
PCF11-205ENST00000530906 IGSF9BQ9UPX0 1349 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 PTPRFP10586 1907 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 WDR81Q562E7 1941 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 A0A087X0T9 212 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 A0A0U1RQJ8 604 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 MACROD2A1Z1Q3 448 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 UNCXA6NJT0 531 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 ZBTB42B2RXF5 422 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 F8VZ95 297 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 MAP2K7O14733 419 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 NKRFO15226 690 aaKnown RBP eCLIP6.02□□□□□ -1.45
PCF11-205ENST00000530906 GAS2O43903 313 aaKnown RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 ZC3H11AO75152 810 aaKnown RBP eCLIP6.02□□□□□ -1.45
PCF11-205ENST00000530906 LGR5O75473 907 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 TBC1D8O95759 1140 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 EGFRP00533 1210 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 PLEKP08567 350 aaPredicted RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 H2AFZP0C0S5 128 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 FAM228BP0C875 321 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 KCNA2P16389 499 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 ZSCAN20P17040 1043 aaPredicted RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 GARTP22102 1010 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 IGFBP4P22692 258 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 CASP4P49662 377 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 VAMP7P51809 220 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 HADHBP55084 474 aaKnown RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 UBXN2AP68543 259 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 GFPT1Q06210 699 aaPredicted RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 BAATQ14032 418 aaPredicted RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 KIF22Q14807 665 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 STXBP2Q15833 593 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 LONRF2Q1L5Z9 754 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 BRDTQ58F21 947 aaPredicted RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 XKR9Q5GH70 373 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 XKR3Q5GH77 459 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 BEND6Q5SZJ8 279 aaPredicted RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 PPP1R2P3Q6NXS1 205 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 MIS18BP1Q6P0N0 1132 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 ALKBH5Q6P6C2 394 aaKnown RBP6.02□□□□□ -1.45
PCF11-205ENST00000530906 KCNV1Q6PIU1 500 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 H2AFVQ71UI9 128 aa6.02□□□□□ -1.45
PCF11-205ENST00000530906 ENOSF1Q7L5Y1 443 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms