RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 CLMNQ96JQ2 1002 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 TRPC7Q9HCX4 862 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 FBXL5Q9UKA1 691 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 GYS2P54840 703 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 FBXW4P57775 412 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 EN1Q05925 392 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 GTF2H3Q13889 308 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 PTK2BQ14289 1009 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 PIGHQ14442 188 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 CPA5Q8WXQ8 436 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 MAP3K14Q99558 947 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ASPSCR1Q9BZE9 553 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 RGL1Q9NZL6 768 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 AGAP1Q9UPQ3 857 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SPATA31A1Q5TZJ5 1347 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 EEF2KO00418 725 aaKnown RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ATP6V1E1P36543 226 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 FOXD4Q12950 439 aaPredicted RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ZBTB17Q13105 803 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SYTL3Q4VX76 610 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ATPAF2Q8N5M1 289 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SLC26A7Q8TE54 656 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 TMEM143Q96AN5 459 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 RMDN1Q96DB5 314 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 MOV10L1Q9BXT6 1211 aaKnown RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SIK2Q9H0K1 926 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 KDM4CQ9H3R0 1056 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ADA2Q9NZK5 511 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 ITM2BQ9Y287 266 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SNX5Q9Y5X3 404 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.94□□□□□ -0.98
CTNND1-227ENST00000530748 PIK3C2BO00750 1634 aa8.94□□□□□ -0.98
CTNND1-227ENST00000530748 SYCE1LA8MT33 242 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 EXTL3O43909 919 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 CSF1RP07333 972 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ANKMY2Q8IV38 441 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ADSSL1Q8N142 457 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 KCTD17Q8N5Z5 321 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 LZICQ8WZA0 190 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 DCUN1D1Q96GG9 259 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TRIM9Q9C026 710 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TSR3Q9UJK0 312 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 SPATA31A6Q5VVP1 1343 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TNPO2O14787 897 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 SLC25A27O95847 323 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 SNRNP35Q16560 246 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 NUDT18Q6ZVK8 323 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 PID1Q7Z2X4 250 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 C18orf8Q96DM3 657 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ARHGEF26Q96DR7 871 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TSPAN17Q96FV3 270 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 PRMT1Q99873 361 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ZFYVE28Q9HCC9 887 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 CASS4Q9NQ75 786 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 SLC38A7Q9NVC3 462 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 KLHL11Q9NVR0 708 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 INO80Q9ULG1 1556 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 MAGEA9P43362 315 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ACADSBP45954 432 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 POLE2P56282 527 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 SLC18A3Q16572 532 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 P3H1Q32P28 736 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 NBPF9Q3BBW0 867 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 PRR5LQ6MZQ0 368 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 RNF135Q8IUD6 432 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ELMO2Q96JJ3 720 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 MXRA8Q9BRK3 442 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 YY1AP1Q9H869 796 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 NSMCE4AQ9NXX6 385 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 CNOT7Q9UIV1 285 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 LSM7Q9UK45 103 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ZC3H4Q9UPT8 1303 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 CFAP73A6NFT4 308 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ATP9BO43861 1147 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 AGTP01019 485 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TYK2P29597 1187 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 DDX53Q86TM3 631 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TTC30BQ8N4P2 665 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TBC1D19Q8N5T2 526 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 KRT35Q92764 455 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 BTBD6Q96KE9 485 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 MCEEQ96PE7 176 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TEX13BQ9BXU2 312 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 XPO7Q9UIA9 1087 aaKnown RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 CD163L1Q9NR16 1453 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ESYT3A0FGR9 886 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 MAGEB2O15479 319 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TADA2AO75478 443 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 TMED1Q13445 227 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 NCOA4Q13772 614 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 LRRC8EQ6NSJ5 796 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 RBBP8NLQ8NC74 664 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 CHST13Q8NET6 341 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 RMDN2Q96LZ7 410 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 ING2Q9H160 280 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 PRDM5Q9NQX1 630 aaPredicted RBP8.93□□□□□ -0.98
CTNND1-227ENST00000530748 SENP1Q9P0U3 644 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 DCTN4Q9UJW0 460 aa8.93□□□□□ -0.98
CTNND1-227ENST00000530748 PTPRMP28827 1452 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms