RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 HOXA9P31269 272 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 ARL6IP4Q66PJ3 421 aaKnown RBP22.9■■□□□ 1.26
SMPD1-204ENST00000530395 MPZL3Q6UWV2 235 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 TAS1R3Q7RTX0 852 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 SPIRE2Q8WWL2 714 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 DDX27Q96GQ7 796 aaKnown RBP22.9■■□□□ 1.26
SMPD1-204ENST00000530395 ACAP3Q96P50 834 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 KCND2Q9NZV8 630 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 MTRRQ9UBK8 725 aa22.9■■□□□ 1.26
SMPD1-204ENST00000530395 ZFP37Q9Y6Q3 630 aaPredicted RBP22.9■■□□□ 1.26
SMPD1-204ENST00000530395 XYLBO75191 536 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 LAMP2P13473 410 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 PLS3P13797 630 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 PROZP22891 400 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 FSHRP23945 695 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 OR1D2P34982 312 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 RAD51AP2Q09MP3 1159 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 RAB33AQ14088 237 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 XKR4Q5GH76 650 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 SIX5Q8N196 739 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 SYT2Q8N9I0 419 aaPredicted RBP22.89■■□□□ 1.25
SMPD1-204ENST00000530395 RSAD2Q8WXG1 361 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 SNX27Q96L92 541 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 PNMA5Q96PV4 448 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 NTPCRQ9BSD7 190 aaKnown RBP22.89■■□□□ 1.25
SMPD1-204ENST00000530395 GOLGA2P5Q9HBQ8 144 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 FAM86C1Q9NVL1 165 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.89■■□□□ 1.25
SMPD1-204ENST00000530395 DOCK6Q96HP0 2047 aa22.89■■□□□ 1.25
SMPD1-204ENST00000530395 SFI1A8K8P3 1242 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 H0Y858 1186 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 ADAM12O43184 909 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 NARSO43776 548 aaKnown RBP22.88■■□□□ 1.25
SMPD1-204ENST00000530395 CD2BP2O95400 341 aaKnown RBP22.88■■□□□ 1.25
SMPD1-204ENST00000530395 HARSP12081 509 aaKnown RBP22.88■■□□□ 1.25
SMPD1-204ENST00000530395 ALKAL1Q6UXT8 129 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 ANKS3Q6ZW76 656 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 GRASPQ7Z6J2 395 aaPredicted RBP22.88■■□□□ 1.25
SMPD1-204ENST00000530395 AK8Q96MA6 479 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 PLIN2Q99541 437 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 ANKFY1Q9P2R3 1169 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 POLIQ9UNA4 740 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 BACE2Q9Y5Z0 518 aa22.88■■□□□ 1.25
SMPD1-204ENST00000530395 PODXLO00592 558 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 SLC26A4O43511 780 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 TOM1L1O75674 476 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 CFHP08603 1231 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 PLA2G4BP0C869 781 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 SRFP11831 508 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 KCNE1P15382 129 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 RFX1P22670 979 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 TKTP29401 623 aaKnown RBP22.87■■□□□ 1.25
SMPD1-204ENST00000530395 SLC12A3P55017 1021 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 NOLC1Q14978 699 aaKnown RBP eCLIP22.87■■□□□ 1.25
SMPD1-204ENST00000530395 UVSSAQ2YD98 709 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 AXDND1Q5T1B0 1012 aaPredicted RBP22.87■■□□□ 1.25
SMPD1-204ENST00000530395 CWF19L1Q69YN2 538 aaKnown RBP22.87■■□□□ 1.25
SMPD1-204ENST00000530395 RTL10Q7L3V2 364 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 SLC44A3Q8N4M1 653 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 C3orf58Q8NDZ4 430 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 SLC7A14Q8TBB6 771 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 CNTN3Q9P232 1028 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 WNT16Q9UBV4 365 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 CDY1Q9Y6F8 540 aa22.87■■□□□ 1.25
SMPD1-204ENST00000530395 ZFHX2Q9C0A1 2572 aaPredicted RBP22.87■■□□□ 1.25
SMPD1-204ENST00000530395 H0YCG3 227 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 CCL16O15467 120 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 POU2F2P09086 479 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 AOC1P19801 751 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 BRCC3P46736 316 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 SOX4Q06945 474 aaPredicted RBP22.86■■□□□ 1.25
SMPD1-204ENST00000530395 TMEM119Q4V9L6 283 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 LARP1BQ659C4 914 aaKnown RBP22.86■■□□□ 1.25
SMPD1-204ENST00000530395 ZPBP2Q6X784 338 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 TMEM161BQ8NDZ6 487 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 CALML4Q96GE6 196 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 RTP3Q9BQQ7 232 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 LARSQ9P2J5 1176 aaKnown RBP22.86■■□□□ 1.25
SMPD1-204ENST00000530395 DMDP11532 3685 aa22.86■■□□□ 1.25
SMPD1-204ENST00000530395 MYH15Q9Y2K3 1946 aa22.85■■□□□ 1.25
SMPD1-204ENST00000530395 I3L4J1 428 aa22.85■■□□□ 1.25
SMPD1-204ENST00000530395 ABLIM1O14639 778 aa22.85■■□□□ 1.25
SMPD1-204ENST00000530395 BMP15O95972 392 aa22.85■■□□□ 1.25
SMPD1-204ENST00000530395 MAPTP10636 758 aaKnown RBP22.85■■□□□ 1.25
SMPD1-204ENST00000530395 IGFBP6P24592 240 aaPredicted RBP22.85■■□□□ 1.25
SMPD1-204ENST00000530395 RPL9P32969 192 aaKnown RBP22.85■■□□□ 1.25
SMPD1-204ENST00000530395 MATR3P43243 847 aaKnown RBP eCLIP22.85■■□□□ 1.25
SMPD1-204ENST00000530395 HTR4Q13639 388 aa22.85■■□□□ 1.25
SMPD1-204ENST00000530395 CD300LGQ6UXG3 332 aa22.85■■□□□ 1.25
SMPD1-204ENST00000530395 ZMAT2Q96NC0 199 aaKnown RBP22.85■■□□□ 1.25
SMPD1-204ENST00000530395 CDH7Q9ULB5 785 aa22.85■■□□□ 1.25
SMPD1-204ENST00000530395 NUB1Q9Y5A7 615 aa22.85■■□□□ 1.25
SMPD1-204ENST00000530395 ANHXE9PGG2 379 aa22.84■■□□□ 1.25
SMPD1-204ENST00000530395 STK25O00506 426 aa22.84■■□□□ 1.25
SMPD1-204ENST00000530395 NPR3P17342 541 aa22.84■■□□□ 1.25
SMPD1-204ENST00000530395 UBA7P41226 1012 aa22.84■■□□□ 1.25
SMPD1-204ENST00000530395 BICD1Q96G01 975 aa22.84■■□□□ 1.25
SMPD1-204ENST00000530395 ZBTB45Q96K62 511 aaPredicted RBP22.84■■□□□ 1.25
SMPD1-204ENST00000530395 NUMBLQ9Y6R0 609 aa22.84■■□□□ 1.25
SMPD1-204ENST00000530395 SYN3O14994 580 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms