RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 POMGNT1Q8WZA1 660 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 UROC1Q96N76 676 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 CDCA3Q99618 268 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 HERC2P3Q9BVR0 1158 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 GPR62Q9BZJ7 368 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 RPF1Q9H9Y2 349 aaKnown RBP13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 CLDND1Q9NY35 253 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 ADAM28Q9UKQ2 775 aa13.81□□□□□ -0.2
CCDC90B-216ENST00000529856 LACTBL1A8MY62 500 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 LINC01565O15544 149 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 LILRB3O75022 631 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 KIF4AO95239 1232 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 GARTP22102 1010 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 LTBRP36941 435 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 ACOT2P49753 483 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 CLCNKBP51801 687 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 POU5F1Q01860 360 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 PSMD2Q13200 908 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 UPP1Q16831 310 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 AAK1Q2M2I8 961 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 KMT5BQ4FZB7 885 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 FUT10Q6P4F1 479 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 DCLRE1AQ6PJP8 1040 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 CD300LGQ6UXG3 332 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 CD302Q8IX05 232 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 ENGASEQ8NFI3 743 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 AUTS2Q8WXX7 1259 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 C18orf25Q96B23 403 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 DDX27Q96GQ7 796 aaKnown RBP13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 ASB2Q96Q27 587 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 TSPAN18Q96SJ8 248 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 GOLGA2P5Q9HBQ8 144 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 SLC39A2Q9NP94 309 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 UNC80Q8N2C7 3258 aa13.8□□□□□ -0.2
CCDC90B-216ENST00000529856 BRWD1Q9NSI6 2320 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 PDCD11Q14690 1871 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 FSD2A1L4K1 749 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 TMEM189-UBE2V1I3L0A0 370 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 CLASP2O75122 1294 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 RPN1P04843 607 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 KCNA5P22460 613 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 IGFBP6P24592 240 aaPredicted RBP13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 RPL9P32969 192 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 PPP2R3AQ06190 1150 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 KCNC3Q14003 757 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 PTPN14Q15678 1187 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 ZBTB6Q15916 424 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 USP41Q3LFD5 358 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 LEXMQ3ZCV2 418 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 KIAA0319Q5VV43 1072 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 KANK3Q6NY19 840 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 EP400NLQ6ZTU2 488 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 HASPINQ8TF76 798 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 SCFD1Q8WVM8 642 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 MRPL17Q9NRX2 175 aaKnown RBP13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 CHST7Q9NS84 486 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 EXOC1Q9NV70 894 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 SSX2IPQ9Y2D8 614 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 UBE4BO95155 1302 aa13.79□□□□□ -0.2
CCDC90B-216ENST00000529856 XIRP2A4UGR9 3374 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 B3GAT3O94766 335 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 GLP2RO95838 553 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 LDHAP00338 332 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 URODP06132 367 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 CA8P35219 290 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 GLUD2P49448 558 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 DSG1Q02413 1049 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 FAM160A1Q05DH4 1040 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 SPAG1Q07617 926 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 DLX2Q07687 328 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 DPYDQ12882 1025 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 ELAVL2Q12926 359 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 STK4Q13043 487 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 BMT2Q1RMZ1 405 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 ARMCX5Q6P1M9 558 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 TMEM184AQ6ZMB5 413 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 GPR65Q8IYL9 337 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 ZSWIM2Q8NEG5 633 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 VN1R2Q8NFZ6 395 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 CBWD1Q9BRT8 395 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 FAM213AQ9BRX8 229 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 PCIF1Q9H4Z3 704 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 ASB7Q9H672 318 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 CLEC1BQ9P126 229 aa13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 UBQLN1Q9UMX0 589 aaKnown RBP13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.78□□□□□ -0.2
CCDC90B-216ENST00000529856 SF3B1O75533 1304 aaKnown RBP eCLIP13.78□□□□□ -0.28e-6■■■■■ 107
CCDC90B-216ENST00000529856 H3BQ06 376 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 PODXLO00592 558 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 C2CD2LO14523 706 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 KIAA0391O15091 583 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 TGFB1I1O43294 461 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 TBX10O75333 385 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms