RNA–Protein interactions for RNA: ENST00000529677.1

PACS1-208, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-208ENST00000529677 PDZD7Q9H5P4 517 aa18.37■□□□□ 0.53
PACS1-208ENST00000529677 AGPAT3Q9NRZ7 376 aa18.37■□□□□ 0.53
PACS1-208ENST00000529677 BARX2Q9UMQ3 279 aaPredicted RBP18.37■□□□□ 0.53
PACS1-208ENST00000529677 PCDHGC5Q9Y5F6 944 aa18.37■□□□□ 0.53
PACS1-208ENST00000529677 BICDL2A1A5D9 508 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 N4BP3O15049 544 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 GARTP22102 1010 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 ADSSP30520 456 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 LIG4P49917 911 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 PMS1P54277 932 aaKnown RBP18.36■□□□□ 0.53
PACS1-208ENST00000529677 RBM10P98175 930 aaKnown RBP18.36■□□□□ 0.53
PACS1-208ENST00000529677 MCL1Q07820 350 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 PTPN21Q16825 1174 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 ANO6Q4KMQ2 910 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 HS2ST1Q7LGA3 356 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 SYCP3Q8IZU3 236 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 EFHBQ8N7U6 833 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 TMEM105Q8N8V8 129 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 SEPT8Q92599 483 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 TMX1Q9H3N1 280 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 DMAC2Q9NW81 257 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 CTNND2Q9UQB3 1225 aa18.36■□□□□ 0.53
PACS1-208ENST00000529677 A0A0B4J269 797 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 TISP43B9A030 160 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 KIAA0391O15091 583 aaKnown RBP18.35■□□□□ 0.53
PACS1-208ENST00000529677 CALUO43852 315 aaPredicted RBP18.35■□□□□ 0.53
PACS1-208ENST00000529677 NCBP1Q09161 790 aaKnown RBP18.35■□□□□ 0.53
PACS1-208ENST00000529677 EEF1DP3Q658K8 133 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 ANKRD40Q6AI12 368 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 SLFN12LQ6IEE8 588 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 KLHL10Q6JEL2 608 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 NOTUMQ6P988 496 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 MPZL3Q6UWV2 235 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 VN1R2Q8NFZ6 395 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 SUSD6Q92537 303 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 APBB2Q92870 758 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 ZNF689Q96CS4 500 aaPredicted RBP18.35■□□□□ 0.53
PACS1-208ENST00000529677 BICD1Q96G01 975 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 RPGRIP1Q96KN7 1286 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 DUSP9Q99956 384 aaKnown RBP18.35■□□□□ 0.53
PACS1-208ENST00000529677 PHF7Q9BWX1 381 aaPredicted RBP18.35■□□□□ 0.53
PACS1-208ENST00000529677 HAPLN2Q9GZV7 340 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 NAT10Q9H0A0 1025 aaKnown RBP18.35■□□□□ 0.53
PACS1-208ENST00000529677 PLAGL2Q9UPG8 496 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 PIN4Q9Y237 131 aaKnown RBP18.35■□□□□ 0.53
PACS1-208ENST00000529677 USP20Q9Y2K6 914 aa18.35■□□□□ 0.53
PACS1-208ENST00000529677 FRYLO94915 3013 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 TTC3P53804 2025 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 TRIM49BA6NDI0 452 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 FAM189A1O60320 539 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 MCF2P10911 925 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 UBXN11Q5T124 520 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 SLC27A1Q6PCB7 646 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 LRRC55Q6ZSA7 311 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 FRMD5Q7Z6J6 570 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 ENOX1Q8TC92 643 aaKnown RBP18.34■□□□□ 0.53
PACS1-208ENST00000529677 CPB2Q96IY4 423 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 RIPOR3Q96MK2 946 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 TSG101Q99816 390 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 FTHL17Q9BXU8 183 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 CDT1Q9H211 546 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
PACS1-208ENST00000529677 NR3C1P04150 777 aa18.33■□□□□ 0.52
PACS1-208ENST00000529677 ITGB1P05556 798 aa18.33■□□□□ 0.52
PACS1-208ENST00000529677 NUBP1P53384 320 aa18.33■□□□□ 0.52
PACS1-208ENST00000529677 NFX1Q12986 1120 aaKnown RBP18.33■□□□□ 0.52
PACS1-208ENST00000529677 NOLC1Q14978 699 aaKnown RBP eCLIP18.33■□□□□ 0.52
PACS1-208ENST00000529677 DCAF4L1Q3SXM0 396 aa18.33■□□□□ 0.52
PACS1-208ENST00000529677 APBB1IPQ7Z5R6 666 aaPredicted RBP18.33■□□□□ 0.52
PACS1-208ENST00000529677 SPPL3Q8TCT6 385 aa18.33■□□□□ 0.52
PACS1-208ENST00000529677 ZBTB45Q96K62 511 aaPredicted RBP18.33■□□□□ 0.52
PACS1-208ENST00000529677 CBWD1Q9BRT8 395 aa18.33■□□□□ 0.52
PACS1-208ENST00000529677 IKBKBO14920 756 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 CLDN3O15551 220 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 MGEA5O60502 916 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 ZNF165P49910 485 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 STX17P56962 302 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 IQCB1Q15051 598 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 ZNF568Q3ZCX4 644 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 ARMCX5Q6P1M9 558 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 LINC01599Q8WXQ3 324 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 RGS18Q9NS28 235 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 HSPBP1Q9NZL4 362 aa18.32■□□□□ 0.52
PACS1-208ENST00000529677 OGTO15294 1046 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 ZNF623O75123 536 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 NR2F2P24468 414 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 RPL13P26373 211 aaKnown RBP18.31■□□□□ 0.52
PACS1-208ENST00000529677 NRIP1P48552 1158 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 RAB27AP51159 221 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
PACS1-208ENST00000529677 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
PACS1-208ENST00000529677 POU5F1Q01860 360 aaKnown RBP18.31■□□□□ 0.52
PACS1-208ENST00000529677 MYL5Q02045 173 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 HSP90AA2PQ14568 343 aaPredicted RBP18.31■□□□□ 0.52
PACS1-208ENST00000529677 NCAPHQ15003 741 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 KYAT1Q16773 422 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 SPATA1Q5VX52 437 aa18.31■□□□□ 0.52
PACS1-208ENST00000529677 RTN4RL1Q86UN2 441 aaPredicted RBP18.31■□□□□ 0.52
PACS1-208ENST00000529677 CDR2LQ86X02 465 aaPredicted RBP18.31■□□□□ 0.52
PACS1-208ENST00000529677 FAM200AQ8TCP9 573 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms