RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 KRT18P05783 430 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 PDGFRBP09619 1106 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 ARF4P18085 180 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 COL9A1P20849 921 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 GNA15P30679 374 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 AMPD3Q01432 767 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 DMP1Q13316 513 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 BIRC2Q13490 618 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 MAPK6Q16659 721 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 UBXN11Q5T124 520 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 TWF2Q6IBS0 349 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 FAM117BQ6P1L5 589 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 NOTUMQ6P988 496 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 DYMQ7RTS9 669 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 MRPL10Q7Z7H8 261 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 ZNF598Q86UK7 904 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 ECHDC2Q86YB7 292 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 MYCT1Q8N699 235 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 C1orf131Q8NDD1 294 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 TMEM161BQ8NDZ6 487 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 STAMQ92783 540 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 DHX58Q96C10 678 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 TIFAQ96CG3 184 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 PYM1Q9BRP8 204 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 KIFC3Q9BVG8 833 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 LRRC27Q9C0I9 530 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 TNMDQ9H2S6 317 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 SEMA6BQ9H3T3 888 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 SLC28A3Q9HAS3 691 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 PARVGQ9HBI0 331 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 KMT5AQ9NQR1 393 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 FAM105AQ9NUU6 356 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 TYW1Q9NV66 732 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 TMEM161AQ9NX61 479 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 ARHGAP28Q9P2N2 729 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 LRFN2Q9ULH4 789 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 DOLKQ9UPQ8 538 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 VPS9D1Q9Y2B5 631 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 ADGRA3Q8IWK6 1321 aa6.86□□□□□ -1.31
ATPAF1-209ENST00000529214 LCHNA4D1U4 455 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 KLHL33A6NCF5 533 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SLC16A4O15374 487 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 B4GALT5O43286 388 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PRKCBP05771 671 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TPM3P06753 285 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CA3P07451 260 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SLFN14P0C7P3 912 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 MAPTP10636 758 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PFKFB1P16118 471 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ATF7P17544 494 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ATF4P18848 351 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CASQ1P31415 396 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 NDUFA8P51970 172 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 NCKAP1LP55160 1127 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 POU5F1Q01860 360 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TAP1Q03518 808 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PRPF4BQ13523 1007 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 NT5DC1Q5TFE4 455 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CNNM4Q6P4Q7 775 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 HAUS6Q7Z4H7 955 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PACS2Q86VP3 889 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CNNM3Q8NE01 707 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 RSPH1Q8WYR4 309 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CCDC51Q96ER9 411 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 CPB2Q96IY4 423 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 FRMD6Q96NE9 622 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 FIZ1Q96SL8 496 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 YME1L1Q96TA2 773 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 C7orf25Q9BPX7 421 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TRIM9Q9C026 710 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 NUCKS1Q9H1E3 243 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 RSPH9Q9H1X1 276 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 NKX2-4Q9H2Z4 354 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TTYH1Q9H313 450 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ZNF576Q9H609 170 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 MAGEF1Q9HAY2 307 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 RC3H2Q9HBD1 1191 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 DONSONQ9NYP3 566 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 USP25Q9UHP3 1055 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SERTAD1Q9UHV2 236 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 GPSM3Q9Y4H4 160 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PCDHB2Q9Y5E7 798 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ARID2Q68CP9 1835 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 PHLPP2Q6ZVD8 1323 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 LOXHD1Q8IVV2 1947 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 MYH15Q9Y2K3 1946 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SZT2Q5T011 3432 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TTC3P53804 2025 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 FRMD3A2A2Y4 597 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 LINC01553A4QN01 128 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 H0YCG3 227 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ACTN4O43707 911 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 TBCAO75347 108 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ARHGEF15O94989 841 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ZNF202O95125 648 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 EDN1P05305 212 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 ABCD1P33897 745 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 SYKP43405 635 aa6.85□□□□□ -1.31
ATPAF1-209ENST00000529214 RAB27AP51159 221 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms