RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 C2orf71A6NGG8 1288 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 M0QZ92 97 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 BAG4O95429 457 aaKnown RBP9.44□□□□□ -0.9
SSBP3-212ENST00000528930 VTNP04004 478 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 P4HBP07237 508 aaKnown RBP9.44□□□□□ -0.9
SSBP3-212ENST00000528930 NDUFV2P19404 249 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 QARSP47897 775 aaKnown RBP9.44□□□□□ -0.9
SSBP3-212ENST00000528930 CLCN3P51790 818 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 PSMC5P62195 406 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 NNTQ13423 1086 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 SAFBQ15424 915 aaKnown RBP eCLIP9.44□□□□□ -0.9
SSBP3-212ENST00000528930 SF3A2Q15428 464 aaKnown RBP9.44□□□□□ -0.9
SSBP3-212ENST00000528930 PTPN14Q15678 1187 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 EFCAB12Q6NXP0 572 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 LRRC71Q8N4P6 559 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 METTL13Q8N6R0 699 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 FAM184AQ8NB25 1140 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 SH2D3AQ9BRG2 576 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 KRTAP4-6Q9BYQ5 205 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 TMEM60Q9H2L4 133 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 TMX1Q9H3N1 280 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 RGL1Q9NZL6 768 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 PCDHA12Q9UN75 941 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 NOC2LQ9Y3T9 749 aaKnown RBP9.44□□□□□ -0.9
SSBP3-212ENST00000528930 MTF2Q9Y483 593 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-212ENST00000528930 EML5Q05BV3 1969 aa9.44□□□□□ -0.9
SSBP3-212ENST00000528930 CELSR3Q9NYQ7 3312 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 DOCK6Q96HP0 2047 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 MARCH6O60337 910 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 NEMFO60524 1076 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 MAFO75444 373 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 RPS6KA5O75582 802 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 SLITRK3O94933 977 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 STAG3L1P0CL83 205 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 U2AF2P26368 475 aaKnown RBP eCLIP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 RPS9P46781 194 aaKnown RBP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 CRYBB1P53674 252 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 NRLP54845 237 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 DRP2Q13474 957 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 CALCRLQ16602 461 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 KIZQ2M2Z5 673 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 TMEM266Q2M3C6 531 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 MTERF2Q49AM1 385 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 NCAPH2Q6IBW4 605 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 NOSTRINQ8IVI9 506 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 C4orf19Q8IY42 314 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 MRPL43Q8N983 215 aaKnown RBP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 DYDC2Q96IM9 177 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 MYADMQ96S97 322 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 OSMRQ99650 979 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 HSD17B14Q9BPX1 270 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 FTHL17Q9BXU8 183 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 ADAMTS10Q9H324 1103 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 TTC12Q9H892 705 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 SFXN1Q9H9B4 322 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 PUF60Q9UHX1 559 aaKnown RBP9.43□□□□□ -0.9
SSBP3-212ENST00000528930 ST3GAL5Q9UNP4 418 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 GINS2Q9Y248 185 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 TEX15Q9BXT5 2789 aa9.43□□□□□ -0.9
SSBP3-212ENST00000528930 ASCC3Q8N3C0 2202 aaKnown RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 ZBTB39O15060 712 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 MGEA5O60502 916 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 DKC1O60832 514 aaKnown RBP eCLIP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 ZNF806P0C7X5 589 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 EPCAMP16422 314 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 ATP2B1P20020 1258 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 TMOD1P28289 359 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 MCM7P33993 719 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 CLCN1P35523 988 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 TXKP42681 527 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 MCM2P49736 904 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 TOB1P50616 345 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 GPC3P51654 580 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 NPEPPSP55786 919 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 NLRP11P59045 1033 aaKnown RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 PAK2Q13177 524 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 SIM2Q14190 667 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 CTTNQ14247 550 aaKnown RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 SMC1AQ14683 1233 aaKnown RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 ZNF174Q15697 407 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 PLA2G4FQ68DD2 849 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 RSPO2Q6UXX9 243 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 TMC5Q6UXY8 1006 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 FAM228AQ86W67 206 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 C4orf32Q8N8J7 132 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 C12orf50Q8NA57 414 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 SLC22A17Q8WUG5 538 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 ZNF668Q96K58 619 aaPredicted RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 KLHL5Q96PQ7 755 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 PPP1R16BQ96T49 567 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 EIF2AK1Q9BQI3 630 aaKnown RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 LXNQ9BS40 222 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 CWH43Q9H720 699 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 LTB4R2Q9NPC1 389 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 EVA1BQ9NVM1 165 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 AKT3Q9Y243 479 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 NUP205Q92621 2012 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 PLXNB3Q9ULL4 1909 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms