RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	GLUD1	P00367	558 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	CLTA	P09496	248 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	RPL17	P18621	184 aa	Known RBP	12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	MATR3	P43243	847 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	ELAVL2	Q12926	359 aa	Known RBP	12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	E2F4	Q16254	413 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	FAM171A1	Q5VUB5	890 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	CES5A	Q6NT32	575 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	DCLRE1A	Q6PJP8	1040 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	TMC5	Q6UXY8	1006 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	ZNF720	Q7Z2F6	126 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	RNF135	Q8IUD6	432 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	KCNG4	Q8TDN1	519 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	PIK3R5	Q8WYR1	880 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	C18orf25	Q96B23	403 aa	Predicted RBP	12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	RPGRIP1	Q96KN7	1286 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	TTPAL	Q9BTX7	342 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	STRA6	Q9BX79	667 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	POMK	Q9H5K3	350 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	SFXN1	Q9H9B4	322 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	SLC38A7	Q9NVC3	462 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	FNIP2	Q9P278	1114 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	RAPGEFL1	Q9UHV5	662 aa		12.84	□□□□□ -0.35
PSMC3-205	ENST00000528362	TTC26	A0AVF1	554 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	FRMD3	A2A2Y4	597 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	TISP43	B9A030	160 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	ANKRD63	C9JTQ0	380 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	PODXL	O00592	558 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	OGT	O15294	1046 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	GAP43	P17677	238 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	FGFR3	P22607	806 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	ABCD1	P33897	745 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	TNFSF9	P41273	254 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	CREM	Q03060	361 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	DNM1	Q05193	864 aa	Known RBP	12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	ATL3	Q6DD88	541 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	CEP57	Q86XR8	500 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	TMEM130	Q8N3G9	435 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	LNX1	Q8TBB1	728 aa	Predicted RBP	12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	DDX27	Q96GQ7	796 aa	Known RBP	12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	NECTIN4	Q96NY8	510 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	MSTO1	Q9BUK6	570 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	IKZF4	Q9H2S9	585 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	PLEKHA5	Q9HAU0	1116 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	C11orf16	Q9NQ32	467 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	MAN1C1	Q9NR34	630 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	TBC1D7	Q9P0N9	293 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	SEL1L	Q9UBV2	794 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	TUBGCP4	Q9UGJ1	667 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362	ZDHHC9	Q9Y397	364 aa		12.83	□□□□□ -0.36
PSMC3-205	ENST00000528362		I3L4J1	428 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	ADAM12	O43184	909 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	TGM5	O43548	720 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	DCX	O43602	365 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	MYB	P10242	640 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	IDE	P14735	1019 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	SP100	P23497	879 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	TKT	P29401	623 aa	Known RBP	12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	MTHFR	P42898	656 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	BRCC3	P46736	316 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	CASP5	P51878	434 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	KCNA1	Q09470	495 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	ENOX2	Q16206	610 aa	Known RBP	12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	PSMD5	Q16401	504 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	KYAT1	Q16773	422 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	HERC4	Q5GLZ8	1057 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	LILRA6	Q6PI73	481 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	GPR149	Q86SP6	731 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	PALB2	Q86YC2	1186 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	GLYCTK	Q8IVS8	523 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	CMAS	Q8NFW8	434 aa	Predicted RBP	12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	STAM	Q92783	540 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	DHX58	Q96C10	678 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	HVCN1	Q96D96	273 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	CHAMP1	Q96JM3	812 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	RIPOR3	Q96MK2	946 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	CLSTN3	Q9BQT9	956 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	C1QTNF1	Q9BXJ1	281 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	FGFBP2	Q9BYJ0	223 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	TNMD	Q9H2S6	317 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	MRPL44	Q9H9J2	332 aa	Known RBP	12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	OLFML3	Q9NRN5	406 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	KBTBD4	Q9NVX7	518 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	MUTYH	Q9UIF7	546 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	PCDHA7	Q9UN72	937 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	STYXL1	Q9Y6J8	313 aa		12.82	□□□□□ -0.36
PSMC3-205	ENST00000528362	FAM86C2P	A6NEL3	165 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	SPDYE4	A6NLX3	237 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	LACTBL1	A8MY62	500 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	RFPL2	O75678	378 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	C1R	P00736	705 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	ADRB2	P07550	413 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	SPATA31D3	P0C874	917 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	ALAD	P13716	330 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	ADSS	P30520	456 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	RPL9	P32969	192 aa	Known RBP	12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	ME1	P48163	572 aa		12.81	□□□□□ -0.36
PSMC3-205	ENST00000528362	SPAG1	Q07617	926 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms