RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 NPTXRO95502 500 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 SP100P23497 879 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 RBM10P98175 930 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 ALCAMQ13740 583 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 KLHL40Q2TBA0 621 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 ATF7IP2Q5U623 682 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 SLC39A4Q6P5W5 647 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 NOTUMQ6P988 496 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 AGMOQ6ZNB7 445 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 EPM2AIP1Q7L775 607 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 RBM23Q86U06 439 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 PRIMPOLQ96LW4 560 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 GSDMAQ96QA5 445 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 PDZD7Q9H5P4 517 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 FAM105AQ9NUU6 356 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 TYW1Q9NV66 732 aaKnown RBP12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 RMND1Q9NWS8 449 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 MIOSQ9NXC5 875 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 KIAA1468Q9P260 1216 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 ANKFY1Q9P2R3 1169 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 KCNG1Q9UIX4 513 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 LRFN2Q9ULH4 789 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 PLAGL2Q9UPG8 496 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 MAPK8IP1Q9UQF2 711 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 PCDHB7Q9Y5E2 793 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 PCDHB13Q9Y5F0 798 aa12.63□□□□□ -0.39
CCDC90B-210ENST00000528149 UBE4BO95155 1302 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 MYO10Q9HD67 2058 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 NT5C1B-RDH14C9J2C7 533 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 N4BP3O15049 544 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 HARSP12081 509 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 IGFBP6P24592 240 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 HOXD13P35453 343 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 LIG4P49917 911 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 PSMD2Q13200 908 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 PUM1Q14671 1186 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 PCBP1Q15365 356 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 ZNF568Q3ZCX4 644 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 STXBP4Q6ZWJ1 553 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 KIAA2013Q8IYS2 634 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 CEP120Q8N960 986 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 KREMEN2Q8NCW0 462 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 SCFD1Q8WVM8 642 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 RABGGTAQ92696 567 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 KCNN1Q92952 543 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 ZBTB45Q96K62 511 aaPredicted RBP12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 ZFP42Q96MM3 310 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 ACCSQ96QU6 501 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 ACO2Q99798 780 aaKnown RBP12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 HAPLN2Q9GZV7 340 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 SMOC2Q9H3U7 446 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 TMEM161AQ9NX61 479 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 KLK14Q9P0G3 267 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 DNAJB4Q9UDY4 337 aa12.62□□□□□ -0.39
CCDC90B-210ENST00000528149 A0A0U1RQF3 1178 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 ANKRD63C9JTQ0 380 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 ITGB1P05556 798 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 ZSCAN20P17040 1043 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 BMP6P22004 513 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 AKAP5P24588 427 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 AXLP30530 894 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.393e-8■■■□□ 19
CCDC90B-210ENST00000528149 MORC3Q14149 939 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 BMT2Q1RMZ1 405 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 SEZ6Q53EL9 994 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 ZNF658Q5TYW1 1059 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 ZNF280BQ86YH2 543 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 FEZF2Q8TBJ5 459 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 PLVAPQ9BX97 442 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 CDT1Q9H211 546 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 C1orf112Q9NSG2 853 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 IPPQ9Y573 584 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 PCDHB2Q9Y5E7 798 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 GPR179Q6PRD1 2367 aa12.61□□□□□ -0.39
CCDC90B-210ENST00000528149 A0A1B0GUA9 196 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 ABLIM1O14639 778 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 OFD1O75665 1012 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 DDHD2O94830 711 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 PIGRP01833 764 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 CD44P16070 742 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 SCP2P22307 547 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 ABCD1P33897 745 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 PRCPP42785 496 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 NCBP1Q09161 790 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 MTMR3Q13615 1198 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 NOLC1Q14978 699 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 SLC27A1Q6PCB7 646 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 MPZL3Q6UWV2 235 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 ZPBP2Q6X784 338 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 RBM43Q6ZSC3 357 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 CMTR2Q8IYT2 770 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 KLHL23Q8NBE8 558 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 COLGALT1Q8NBJ5 622 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 VN1R2Q8NFZ6 395 aa12.6□□□□□ -0.39
CCDC90B-210ENST00000528149 ZNF507Q8TCN5 953 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms