RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 DDX12PQ92771 950 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 C18orf25Q96B23 403 aaPredicted RBP16.97■□□□□ 0.31
CAPN1-213ENST00000527897 ZMAT2Q96NC0 199 aaKnown RBP16.97■□□□□ 0.31
CAPN1-213ENST00000527897 LRFN3Q9BTN0 628 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 RXFP1Q9HBX9 757 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 SLC38A7Q9NVC3 462 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 TBC1D7Q9P0N9 293 aa16.97■□□□□ 0.31
CAPN1-213ENST00000527897 A0A087X0B3 334 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 MYMKA6NI61 221 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 I3L4J1 428 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 BRD1O95696 1058 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 F13A1P00488 732 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 IDEP14735 1019 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 COL9A1P20849 921 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 BRCC3P46736 316 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 CREMQ03060 361 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 SPAG1Q07617 926 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 ELAVL2Q12926 359 aaKnown RBP16.96■□□□□ 0.31
CAPN1-213ENST00000527897 DCLRE1AQ6PJP8 1040 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 ALKAL1Q6UXT8 129 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 FAM212AQ96EL1 285 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 UROC1Q96N76 676 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 HAPLN2Q9GZV7 340 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 CNTN3Q9P232 1028 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 RAPGEFL1Q9UHV5 662 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 NR2E1Q9Y466 385 aa16.96■□□□□ 0.31
CAPN1-213ENST00000527897 VWA8A3KMH1 1905 aa16.96■□□□□ 0.3
CAPN1-213ENST00000527897 C2orf16Q68DN1 1984 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 CCDC195A0A1B0GUA6 201 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 PODXLO00592 558 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 TGM5O43548 720 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 RFPL2O75678 378 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 KCNE1P15382 129 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 TNFSF9P41273 254 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 PKP1Q13835 747 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 UPP1Q16831 310 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 SLC10A6Q3KNW5 377 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 XKR4Q5GH76 650 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 C3orf58Q8NDZ4 430 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 STAMQ92783 540 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 KIF12Q96FN5 646 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 MSTO1Q9BUK6 570 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 MRPL44Q9H9J2 332 aaKnown RBP16.95■□□□□ 0.3
CAPN1-213ENST00000527897 C11orf16Q9NQ32 467 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 FNIP2Q9P278 1114 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 DPP7Q9UHL4 492 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 NUB1Q9Y5A7 615 aa16.95■□□□□ 0.3
CAPN1-213ENST00000527897 PDCD11Q14690 1871 aaKnown RBP16.95■□□□□ 0.3
CAPN1-213ENST00000527897 C2CD4DB7Z1M9 353 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 TMEM189-UBE2V1I3L0A0 370 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 MEFVO15553 781 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 TRAPPC3O43617 180 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 GPR37L1O60883 481 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 YEATS4O95619 227 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 CLTAP09496 248 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 TKTP29401 623 aaKnown RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 PPP2R3AQ06190 1150 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 HERC4Q5GLZ8 1057 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 ZBTB41Q5SVQ8 909 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 GPR149Q86SP6 731 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 TMEM130Q8N3G9 435 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 TDRD5Q8NAT2 981 aaKnown RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 LNX1Q8TBB1 728 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 PIK3R5Q8WYR1 880 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 DDX27Q96GQ7 796 aaKnown RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 FIZ1Q96SL8 496 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 RPF1Q9H9Y2 349 aaKnown RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 PIDD1Q9HB75 910 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 TUBGCP4Q9UGJ1 667 aa16.94■□□□□ 0.3
CAPN1-213ENST00000527897 MTCL1Q9Y4B5 1905 aaKnown RBP16.94■□□□□ 0.3
CAPN1-213ENST00000527897 TISP43B9A030 160 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 OGTO15294 1046 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 CUTAO60888 179 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 PPP6R2O75170 966 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 PDIA4P13667 645 aaKnown RBP16.93■□□□□ 0.3
CAPN1-213ENST00000527897 SCP2P22307 547 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 ABCD1P33897 745 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 GTF2BQ00403 316 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 SLC39A4Q6P5W5 647 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 CCDC149Q6ZUS6 474 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 MAP4K3Q8IVH8 894 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 KREMEN2Q8NCW0 462 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 SMG7Q92540 1137 aaKnown RBP16.93■□□□□ 0.3
CAPN1-213ENST00000527897 DHX58Q96C10 678 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 CLSTN3Q9BQT9 956 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 IKZF4Q9H2S9 585 aa16.93■□□□□ 0.3
CAPN1-213ENST00000527897 MORC2Q9Y6X9 1032 aaPredicted RBP16.93■□□□□ 0.3
CAPN1-213ENST00000527897 LACTBL1A8MY62 500 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 ANKRD63C9JTQ0 380 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 ADAM12O43184 909 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 GCNT3O95395 438 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 PIGRP01833 764 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 GAP43P17677 238 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 MCM4P33991 863 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 OR1D2P34982 312 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 ME1P48163 572 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 ADALQ6DHV7 355 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 PDXDC1Q6P996 788 aa16.92■□□□□ 0.3
CAPN1-213ENST00000527897 CD300LGQ6UXG3 332 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms