RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CLCNKBP51801 687 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 CUL4AQ13619 759 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 RAB33AQ14088 237 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 KYAT1Q16773 422 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 PRSS55Q6UWB4 352 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-212ENST00000527887 SPATA31D4Q6ZUB0 917 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 ANKS3Q6ZW76 656 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 HASPINQ8TF76 798 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 CXCL16Q9H2A7 254 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 CNTN3Q9P232 1028 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 MTRRQ9UBK8 725 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 CACNG4Q9UBN1 327 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 ZDBF2Q9HCK1 2354 aa15.54■□□□□ 0.08
CAPN1-212ENST00000527887 SFI1A8K8P3 1242 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 ABLIM1O14639 778 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 XYLBO75191 536 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 MAPTP10636 758 aaKnown RBP15.53■□□□□ 0.08
CAPN1-212ENST00000527887 GBP2P32456 591 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-212ENST00000527887 CLCN5P51795 746 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 IER5LQ5T953 404 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 CEP120Q8N960 986 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 SNX27Q96L92 541 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 PLEKHA5Q9HAU0 1116 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 DUSP12Q9UNI6 340 aa15.53■□□□□ 0.08
CAPN1-212ENST00000527887 SYN3O14994 580 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 CLDN3O15551 220 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 NCKAP1LP55160 1127 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 MCL1Q07820 350 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 NOLC1Q14978 699 aaKnown RBP eCLIP15.52■□□□□ 0.08
CAPN1-212ENST00000527887 ARSHQ5FYA8 562 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 GLRA4Q5JXX5 417 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 PPM1LQ5SGD2 360 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 GLYCTKQ8IVS8 523 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 PRSS33Q8NF86 280 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 FEZF2Q8TBJ5 459 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 TSPAN18Q96SJ8 248 aa15.52■□□□□ 0.08
CAPN1-212ENST00000527887 TDRD15B5MCY1 1934 aaKnown RBP15.52■□□□□ 0.07
CAPN1-212ENST00000527887 PODXLO00592 558 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 N4BP1O75113 896 aaKnown RBP15.51■□□□□ 0.07
CAPN1-212ENST00000527887 C8AP07357 584 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 LAMP2P13473 410 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 OR1D2P34982 312 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 ZNF131P52739 623 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 VCPP55072 806 aaKnown RBP15.51■□□□□ 0.07
CAPN1-212ENST00000527887 OSTNP61366 133 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 RAD51AP2Q09MP3 1159 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 ASTLQ6HA08 431 aaPredicted RBP15.51■□□□□ 0.07
CAPN1-212ENST00000527887 CD300LGQ6UXG3 332 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 PLIN2Q99541 437 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 MFSD1Q9H3U5 465 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 WNT16Q9UBV4 365 aa15.51■□□□□ 0.07
CAPN1-212ENST00000527887 H7C4K7 107 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 CLTAP09496 248 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 MYBP10242 640 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 FSHRP23945 695 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 TCF15Q12870 199 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 SF3A1Q15459 793 aaKnown RBP15.5■□□□□ 0.07
CAPN1-212ENST00000527887 SLC10A6Q3KNW5 377 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 AXDND1Q5T1B0 1012 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-212ENST00000527887 SLC8B1Q6J4K2 584 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 HAUS6Q7Z4H7 955 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 ALYREFQ86V81 257 aaKnown RBP15.5■□□□□ 0.07
CAPN1-212ENST00000527887 SLC44A3Q8N4M1 653 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
CAPN1-212ENST00000527887 ZBTB45Q96K62 511 aaPredicted RBP15.5■□□□□ 0.07
CAPN1-212ENST00000527887 ZMAT2Q96NC0 199 aaKnown RBP15.5■□□□□ 0.07
CAPN1-212ENST00000527887 MYADMQ96S97 322 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 CCSER1Q9C0I3 900 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 PARVGQ9HBI0 331 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 GOLGA2P5Q9HBQ8 144 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 MAFFQ9ULX9 164 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 NUB1Q9Y5A7 615 aa15.5■□□□□ 0.07
CAPN1-212ENST00000527887 ANHXE9PGG2 379 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 XPOTO43592 962 aaKnown RBP15.49■□□□□ 0.07
CAPN1-212ENST00000527887 GALR2O43603 387 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-212ENST00000527887 FAM13AO94988 1023 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 PDGFBP01127 241 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-212ENST00000527887 PIGRP01833 764 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 PAX3P23760 479 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 TKTP29401 623 aaKnown RBP15.49■□□□□ 0.07
CAPN1-212ENST00000527887 DDIT3P35638 169 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 MRE11P49959 708 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 SOX4Q06945 474 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-212ENST00000527887 MRPL58Q14197 206 aaKnown RBP15.49■□□□□ 0.07
CAPN1-212ENST00000527887 GRASPQ7Z6J2 395 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-212ENST00000527887 GPBP1Q86WP2 473 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 C3orf58Q8NDZ4 430 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 APPL2Q8NEU8 664 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 RASSF8Q8NHQ8 419 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 ZNF461Q8TAF7 563 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 RAD54LQ92698 747 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 BICD1Q96G01 975 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 RTP3Q9BQQ7 232 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 OXCT2Q9BYC2 517 aaPredicted RBP15.49■□□□□ 0.07
CAPN1-212ENST00000527887 ANKFY1Q9P2R3 1169 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 FBXL21Q9UKT6 434 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 CDH7Q9ULB5 785 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 KCNH3Q9ULD8 1083 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 CDY1Q9Y6F8 540 aa15.49■□□□□ 0.07
CAPN1-212ENST00000527887 VPS37CA5D8V6 355 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms