RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PCSK1P29120 753 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 SLC1A1P43005 524 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 CUL1Q13616 776 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 SLMAPQ14BN4 828 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 FYB2Q5VWT5 728 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 CCDC110Q8TBZ0 833 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 WHAMMQ8TF30 809 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 FMO2Q99518 471 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.154e-6■□□□□ 8
USP47-207ENST00000527733 HDAC6Q9UBN7 1215 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 POLIQ9UNA4 740 aa16.01■□□□□ 0.15
USP47-207ENST00000527733 ADCY3O60266 1144 aa16■□□□□ 0.15
USP47-207ENST00000527733 CYP2C19P33261 490 aa16■□□□□ 0.15
USP47-207ENST00000527733 TAF6P49848 677 aa16■□□□□ 0.15
USP47-207ENST00000527733 CYP24A1Q07973 514 aa16■□□□□ 0.15
USP47-207ENST00000527733 NOGQ13253 232 aa16■□□□□ 0.15
USP47-207ENST00000527733 CUL2Q13617 745 aa16■□□□□ 0.15
USP47-207ENST00000527733 TRAPPC11Q7Z392 1133 aa16■□□□□ 0.15
USP47-207ENST00000527733 CGRRF1Q99675 332 aa16■□□□□ 0.15
USP47-207ENST00000527733 MTIF3Q9H2K0 278 aaKnown RBP16■□□□□ 0.15
USP47-207ENST00000527733 SLITRK6Q9H5Y7 841 aa16■□□□□ 0.15
USP47-207ENST00000527733 DDX56Q9NY93 547 aaKnown RBP16■□□□□ 0.15
USP47-207ENST00000527733 MORC2Q9Y6X9 1032 aaPredicted RBP16■□□□□ 0.15
USP47-207ENST00000527733 COL16A1Q07092 1604 aaPredicted RBP16■□□□□ 0.15
USP47-207ENST00000527733 IL17AQ16552 155 aa16■□□□□ 0.15
USP47-207ENST00000527733 CYP4F22Q6NT55 531 aa16■□□□□ 0.15
USP47-207ENST00000527733 MMS22LQ6ZRQ5 1243 aa16■□□□□ 0.15
USP47-207ENST00000527733 CCDC13Q8IYE1 715 aa16■□□□□ 0.15
USP47-207ENST00000527733 SLC35G2Q8TBE7 412 aa16■□□□□ 0.15
USP47-207ENST00000527733 OSMRQ99650 979 aa16■□□□□ 0.15
USP47-207ENST00000527733 DPP3Q9NY33 737 aa16■□□□□ 0.15
USP47-207ENST00000527733 COL1A1P02452 1464 aaPredicted RBP16■□□□□ 0.15
USP47-207ENST00000527733 GTPBP10A4D1E9 387 aaKnown RBP16■□□□□ 0.15
USP47-207ENST00000527733 GRID2IPA4D2P6 1211 aa16■□□□□ 0.15
USP47-207ENST00000527733 SPATA31C2B4DYI2 1134 aa16■□□□□ 0.15
USP47-207ENST00000527733 STAG3L1P0CL83 205 aa16■□□□□ 0.15
USP47-207ENST00000527733 GEN1Q17RS7 908 aa16■□□□□ 0.15
USP47-207ENST00000527733 TAF2Q6P1X5 1199 aa16■□□□□ 0.15
USP47-207ENST00000527733 HSD17B14Q9BPX1 270 aa16■□□□□ 0.15
USP47-207ENST00000527733 MTMR12Q9C0I1 747 aa16■□□□□ 0.15
USP47-207ENST00000527733 AFG3L2Q9Y4W6 797 aa16■□□□□ 0.15
USP47-207ENST00000527733 CICQ96RK0 1608 aaPredicted RBP16■□□□□ 0.15
USP47-207ENST00000527733 ATP9AO75110 1047 aa16■□□□□ 0.15
USP47-207ENST00000527733 TFRCP02786 760 aaKnown RBP16■□□□□ 0.15
USP47-207ENST00000527733 ATP1A1P05023 1023 aaKnown RBP16■□□□□ 0.15
USP47-207ENST00000527733 LGALS2P05162 132 aa16■□□□□ 0.15
USP47-207ENST00000527733 DEFB115Q30KQ5 88 aa16■□□□□ 0.15
USP47-207ENST00000527733 ZPBP2Q6X784 338 aa16■□□□□ 0.15
USP47-207ENST00000527733 GPR142Q7Z601 462 aa16■□□□□ 0.15
USP47-207ENST00000527733 PDIK1LQ8N165 341 aa16■□□□□ 0.15
USP47-207ENST00000527733 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16■□□□□ 0.15
USP47-207ENST00000527733 TRAPPC12Q8WVT3 735 aa16■□□□□ 0.15
USP47-207ENST00000527733 GTF3C5Q9Y5Q8 519 aaPredicted RBP16■□□□□ 0.15
USP47-207ENST00000527733 TMEM253P0C7T8 217 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 PPARDQ03181 441 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 LRRC31Q6UY01 552 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 SPATA2LQ8IUW3 424 aaPredicted RBP15.99■□□□□ 0.15
USP47-207ENST00000527733 ANKRD42Q8N9B4 389 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 C7orf43Q8WVR3 580 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 SMC6Q96SB8 1091 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 DNAJC7Q99615 494 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 DUSP9Q99956 384 aaKnown RBP15.99■□□□□ 0.15
USP47-207ENST00000527733 FOXN3O00409 490 aaPredicted RBP15.99■□□□□ 0.15
USP47-207ENST00000527733 WNT7AO00755 349 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 PFDN6O15212 129 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 LCP1P13796 627 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 ATP11AP98196 1134 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 INPP4AQ96PE3 977 aaPredicted RBP15.99■□□□□ 0.15
USP47-207ENST00000527733 XPNPEP3Q9NQH7 507 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 STARD7Q9NQZ5 370 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 KLK14Q9P0G3 267 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 LTBP4Q8N2S1 1624 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 GIPC1O14908 333 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 BUB1BO60566 1050 aaPredicted RBP15.99■□□□□ 0.15
USP47-207ENST00000527733 CPP00450 1065 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 STX2P32856 288 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 MAP2K5Q13163 448 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 MFSD10Q14728 455 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.99■□□□□ 0.15
USP47-207ENST00000527733 SV2AQ7L0J3 742 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 ZNF710Q8N1W2 664 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 FBF1Q8TES7 1133 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 IPO11Q9UI26 975 aaKnown RBP15.99■□□□□ 0.15
USP47-207ENST00000527733 HEY1Q9Y5J3 304 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
USP47-207ENST00000527733 UPP2O95045 317 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 RGS7P49802 495 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 FSCN1Q16658 493 aaKnown RBP15.98■□□□□ 0.15
USP47-207ENST00000527733 EFHC2Q5JST6 749 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 GLRA4Q5JXX5 417 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 BTBD8Q5XKL5 378 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 EMBQ6PCB8 327 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 GSDMBQ8TAX9 411 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 GMLQ99445 158 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 SNX12Q9UMY4 172 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 POC1B-GALNT4F8VUJ3 575 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 ACKR2O00590 384 aa15.98■□□□□ 0.15
USP47-207ENST00000527733 CSDE1O75534 798 aaKnown RBP15.98■□□□□ 0.15
USP47-207ENST00000527733 INHBAP08476 426 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms