RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 FGFBP2Q9BYJ0 223 aa18.93■□□□□ 0.62
LTBP3-208ENST00000527339 STK39Q9UEW8 545 aa18.93■□□□□ 0.62
LTBP3-208ENST00000527339 STYXL1Q9Y6J8 313 aa18.93■□□□□ 0.62
LTBP3-208ENST00000527339 ANK1P16157 1881 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 ANKRD63C9JTQ0 380 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 EIF3DO15371 548 aaKnown RBP eCLIP18.92■□□□□ 0.62
LTBP3-208ENST00000527339 CLTAP09496 248 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 KCNA1Q09470 495 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 KRBA2Q6ZNG9 492 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 RBM23Q86U06 439 aaKnown RBP18.92■□□□□ 0.62
LTBP3-208ENST00000527339 PRSS33Q8NF86 280 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 EDAQ92838 391 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 PPP2R3CQ969Q6 453 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 CCDC34Q96HJ3 373 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 SNX27Q96L92 541 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 MSTO1Q9BUK6 570 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 CXCL16Q9H2A7 254 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 TMEM206Q9H813 350 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 CNTN3Q9P232 1028 aa18.92■□□□□ 0.62
LTBP3-208ENST00000527339 BARX2Q9UMQ3 279 aaPredicted RBP18.92■□□□□ 0.62
LTBP3-208ENST00000527339 FSCN2O14926 492 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 FAM189A1O60320 539 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 NRIP1P48552 1158 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 NDUFV1P49821 464 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 ERVFC1P60507 584 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 POSTNQ15063 836 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 NAB2Q15742 525 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 SEZ6Q53EL9 994 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 DDX53Q86TM3 631 aaKnown RBP18.91■□□□□ 0.62
LTBP3-208ENST00000527339 SYCP3Q8IZU3 236 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 FMR1NBQ8N0W7 255 aaPredicted RBP18.91■□□□□ 0.62
LTBP3-208ENST00000527339 EFHBQ8N7U6 833 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 SMRP1Q8NCR6 262 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 VN1R2Q8NFZ6 395 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 BCL7CQ8WUZ0 217 aaPredicted RBP18.91■□□□□ 0.62
LTBP3-208ENST00000527339 HPS3Q969F9 1004 aa18.91■□□□□ 0.62
LTBP3-208ENST00000527339 PPP1R10Q96QC0 940 aaKnown RBP18.91■□□□□ 0.62
LTBP3-208ENST00000527339 PRG3Q9Y2Y8 225 aaPredicted RBP18.91■□□□□ 0.62
LTBP3-208ENST00000527339 SMIM28A0A1B0GU29 152 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 LOC730098B7Z3J9 87 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 KLRC4O43908 158 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 PRPF6O94906 941 aaKnown RBP18.9■□□□□ 0.62
LTBP3-208ENST00000527339 KCNE1P15382 129 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 BMS1Q14692 1282 aaKnown RBP18.9■□□□□ 0.62
LTBP3-208ENST00000527339 GLRA4Q5JXX5 417 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 KANK3Q6NY19 840 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 EPM2AIP1Q7L775 607 aaPredicted RBP18.9■□□□□ 0.62
LTBP3-208ENST00000527339 TMC7Q7Z402 723 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 GLIS3Q8NEA6 775 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 MICAL1Q8TDZ2 1067 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 POMGNT1Q8WZA1 660 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 POP1Q99575 1024 aaKnown RBP18.9■□□□□ 0.62
LTBP3-208ENST00000527339 TCF25Q9BQ70 676 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 COLEC11Q9BWP8 271 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 KCNH6Q9H252 994 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 IKZF4Q9H2S9 585 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 PLEKHA5Q9HAU0 1116 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 NGRNQ9NPE2 291 aaKnown RBP18.9■□□□□ 0.62
LTBP3-208ENST00000527339 ENTPD7Q9NQZ7 604 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 EXOC1Q9NV70 894 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 SLC38A7Q9NVC3 462 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 MARCH5Q9NX47 278 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 AGO2Q9UKV8 859 aaKnown RBP18.9■□□□□ 0.62
LTBP3-208ENST00000527339 UBE4BO95155 1302 aa18.9■□□□□ 0.62
LTBP3-208ENST00000527339 ZFHX2Q9C0A1 2572 aaPredicted RBP18.89■□□□□ 0.62
LTBP3-208ENST00000527339 TISP43B9A030 160 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 PER2O15055 1255 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 CXCL8P10145 99 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 GARTP22102 1010 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 ADSSP30520 456 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 TNFSF9P41273 254 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 FAM160A1Q05DH4 1040 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 PSMD2Q13200 908 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 SLC10A6Q3KNW5 377 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 VPS52Q8N1B4 723 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 TMEM87AQ8NBN3 555 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 ENGASEQ8NFI3 743 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 ZNF507Q8TCN5 953 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 ZBP1Q9H171 429 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 RPF1Q9H9Y2 349 aaKnown RBP18.89■□□□□ 0.61
LTBP3-208ENST00000527339 CPSF3Q9UKF6 684 aaKnown RBP18.89■□□□□ 0.61
LTBP3-208ENST00000527339 USP15Q9Y4E8 981 aaPredicted RBP18.89■□□□□ 0.61
LTBP3-208ENST00000527339 VPS13AQ96RL7 3174 aa18.89■□□□□ 0.61
LTBP3-208ENST00000527339 TTC26A0AVF1 554 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 CASTOR2A6NHX0 329 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 MEFVO15553 781 aaPredicted RBP18.88■□□□□ 0.61
LTBP3-208ENST00000527339 RPN1P04843 607 aaKnown RBP18.88■□□□□ 0.61
LTBP3-208ENST00000527339 PRR29P0C7W0 189 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 POU5F1Q01860 360 aaKnown RBP18.88■□□□□ 0.61
LTBP3-208ENST00000527339 PPP2R3AQ06190 1150 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 DPYDQ12882 1025 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 SNW1Q13573 536 aaKnown RBP18.88■□□□□ 0.61
LTBP3-208ENST00000527339 HSP90AA2PQ14568 343 aaPredicted RBP18.88■□□□□ 0.61
LTBP3-208ENST00000527339 SMC1AQ14683 1233 aaKnown RBP18.88■□□□□ 0.61
LTBP3-208ENST00000527339 KMT5BQ4FZB7 885 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 ZBTB41Q5SVQ8 909 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 PLPP4Q5VZY2 271 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 TRIM67Q6ZTA4 783 aa18.88■□□□□ 0.61
LTBP3-208ENST00000527339 CCDC47Q96A33 483 aaKnown RBP18.88■□□□□ 0.61
LTBP3-208ENST00000527339 MFSD14AQ96MC6 490 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms