RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 VIMP08670 466 aaKnown RBP12.45□□□□□ -0.42
LINC01001-201ENST00000526704 KRT5P13647 590 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 GTF2H1P32780 548 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 SOX10P56693 466 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 DGKZQ13574 1117 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 SNCBQ16143 134 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 SV2AQ7L0J3 742 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 OTUD6AQ7L8S5 288 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 SNF8Q96H20 258 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 ELAC2Q9BQ52 826 aaKnown RBP12.45□□□□□ -0.42
LINC01001-201ENST00000526704 KMT5AQ9NQR1 393 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 SAMD15Q9P1V8 674 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 PLSCR1O15162 318 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 ASNSP08243 561 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 MYCLP12524 364 aaPredicted RBP12.45□□□□□ -0.42
LINC01001-201ENST00000526704 CREB1P16220 341 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 RPS6P62753 249 aaKnown RBP12.45□□□□□ -0.42
LINC01001-201ENST00000526704 GCNT1Q02742 428 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 LLGL2Q6P1M3 1020 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 VSTM1Q6UX27 236 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 MCOLN2Q8IZK6 566 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 PLVAPQ9BX97 442 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 DCLK3Q9C098 648 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 AVENQ9NQS1 362 aaPredicted RBP12.45□□□□□ -0.42
LINC01001-201ENST00000526704 CTNNAL1Q9UBT7 734 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
LINC01001-201ENST00000526704 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
LINC01001-201ENST00000526704 MYPNQ86TC9 1320 aa12.45□□□□□ -0.42
LINC01001-201ENST00000526704 WDR46O15213 610 aaKnown RBP12.44□□□□□ -0.42
LINC01001-201ENST00000526704 C21orf2O43822 256 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 GSTA1P08263 222 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 ITGA8P53708 1063 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 GSCP56915 257 aaPredicted RBP12.44□□□□□ -0.42
LINC01001-201ENST00000526704 TRIP13Q15645 432 aaPredicted RBP12.44□□□□□ -0.42
LINC01001-201ENST00000526704 FKBP1CQ5VVH2 108 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 GPATCH11Q8N954 259 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 POMGNT1Q8WZA1 660 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
LINC01001-201ENST00000526704 SERPINB12Q96P63 405 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 NSRP1Q9H0G5 558 aaKnown RBP12.44□□□□□ -0.42
LINC01001-201ENST00000526704 SLC38A10Q9HBR0 1119 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 R3HDM2Q9Y2K5 976 aaKnown RBP12.44□□□□□ -0.42
LINC01001-201ENST00000526704 RLFQ13129 1914 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 ITIH2P19823 946 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 RRM1P23921 792 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 SFNP31947 248 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 KRT76Q01546 638 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 LRRC14Q15048 493 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 DAB2IPQ5VWQ8 1189 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 PHLDB2Q86SQ0 1253 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 SPIRE2Q8WWL2 714 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 ARHGEF2Q92974 986 aaKnown RBP12.44□□□□□ -0.42
LINC01001-201ENST00000526704 PXMP2Q9NR77 195 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 HOMER3Q9NSC5 361 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 ABCF3Q9NUQ8 709 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 DNAJC17Q9NVM6 304 aaKnown RBP12.44□□□□□ -0.42
LINC01001-201ENST00000526704 TCEAL9Q9UHQ7 104 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 UMODL1Q5DID0 1318 aa12.44□□□□□ -0.42
LINC01001-201ENST00000526704 TMEM120BA0PK00 339 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 FOXO6A8MYZ6 492 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 MGRN1O60291 552 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 SCP2P22307 547 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 MAN1A1P33908 653 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 C15orf39Q6ZRI6 1047 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 SYDE1Q6ZW31 735 aaPredicted RBP12.43□□□□□ -0.42
LINC01001-201ENST00000526704 ENOSF1Q7L5Y1 443 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 TRPM8Q7Z2W7 1104 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 FAM83AQ86UY5 434 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 GPD1LQ8N335 351 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 MGARPQ8TDB4 240 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 CPA5Q8WXQ8 436 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 PDCD2LQ9BRP1 358 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 LCTP09848 1927 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 TNS1Q9HBL0 1735 aaKnown RBP12.43□□□□□ -0.42
LINC01001-201ENST00000526704 O00370 1275 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 CLGNO14967 610 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 SNX3O60493 162 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 SORBS3O60504 671 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 TTC4O95801 387 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 APBA3O96018 575 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 ELF3P78545 371 aaPredicted RBP12.43□□□□□ -0.42
LINC01001-201ENST00000526704 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 PREPLQ4J6C6 727 aaPredicted RBP12.43□□□□□ -0.42
LINC01001-201ENST00000526704 C2CD6Q53TS8 623 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 TAS1R3Q7RTX0 852 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 OGFOD1Q8N543 542 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 GRK7Q8WTQ7 553 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 MAIP1Q8WWC4 291 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 ZNF516Q92618 1163 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 RMDN3Q96TC7 470 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 NTPCRQ9BSD7 190 aaKnown RBP12.43□□□□□ -0.42
LINC01001-201ENST00000526704 NINJ2Q9NZG7 142 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 NEU2Q9Y3R4 380 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 CD2APQ9Y5K6 639 aa12.43□□□□□ -0.42
LINC01001-201ENST00000526704 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
LINC01001-201ENST00000526704 HNRNPDLO14979 420 aaKnown RBP12.42□□□□□ -0.42
LINC01001-201ENST00000526704 ZNF862O60290 1169 aa12.42□□□□□ -0.42
LINC01001-201ENST00000526704 ZC3H11AO75152 810 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC01001-201ENST00000526704 MYBL1P10243 752 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms