RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 TRMT2AQ8IZ69 625 aaKnown RBP4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 FAM43AQ8N2R8 423 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 ZBTB9Q96C00 473 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 KCTD10Q9H3F6 313 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 CPNE5Q9HCH3 593 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 DMTF1Q9Y222 760 aa4.02□□□□□ -1.77
ECHDC1-219ENST00000526299 PHF2O75151 1096 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 PRSS23O95084 383 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 FKBP9O95302 570 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 POMCP01189 267 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 SLC6A2P23975 617 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 VAV2P52735 878 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 EXOSC10Q01780 885 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 UBXN2BQ14CS0 331 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 FOXR2Q6PJQ5 311 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 FKBP9P1Q75LS8 142 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 PTF1AQ7RTS3 328 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 ZNF572Q7Z3I7 529 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 C11orf74Q86VG3 221 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 THNSL2Q86YJ6 484 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 STON2Q8WXE9 905 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 EAF2Q96CJ1 260 aaPredicted RBP4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 PAWRQ96IZ0 340 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 MRI1Q9BV20 369 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 TMEM260Q9NX78 707 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 KCNE5Q9UJ90 142 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 MTO1Q9Y2Z2 717 aaKnown RBP4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 CD2APQ9Y5K6 639 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 ATRNL1Q5VV63 1379 aa4.01□□□□□ -1.77
ECHDC1-219ENST00000526299 PEX1O43933 1283 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 RAP2AP10114 183 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 ALOX15P16050 662 aaPredicted RBP4□□□□□ -1.77
ECHDC1-219ENST00000526299 GCSHP23434 173 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 ITPKBP27987 946 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 LSSP48449 732 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 CDK17Q00537 523 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 TCEA2Q15560 299 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 EZH2Q15910 746 aaKnown RBP4□□□□□ -1.77
ECHDC1-219ENST00000526299 UGT8Q16880 541 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 RASSF3Q86WH2 238 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 DHX37Q8IY37 1157 aaKnown RBP4□□□□□ -1.77
ECHDC1-219ENST00000526299 LNX2Q8N448 690 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 SSH3Q8TE77 659 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 HASPINQ8TF76 798 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 RIN2Q8WYP3 895 aaPredicted RBP4□□□□□ -1.77
ECHDC1-219ENST00000526299 SARAFQ96BY9 339 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 TIMP4Q99727 224 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 SIK3Q9Y2K2 1263 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 ENTPD2Q9Y5L3 495 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 KAT6AQ92794 2004 aa4□□□□□ -1.77
ECHDC1-219ENST00000526299 TP73O15350 636 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 KCNAB3O43448 404 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 ERN1O75460 977 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 GPD1P21695 349 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 ADCYAP1R1P41586 468 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 PER3P56645 1201 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 CCT2P78371 535 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 PDCD1Q15116 288 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 SF3B3Q15393 1217 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 SEPT7Q16181 437 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 GEN1Q17RS7 908 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 MST1LQ2TV78 715 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 TSTD2Q5T7W7 516 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 KIAA1614Q5VZ46 1190 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 AFMIDQ63HM1 303 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 GRASPQ7Z6J2 395 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 DRC7Q8IY82 874 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 AHI1Q8N157 1196 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 SYNPOQ8N3V7 929 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 GPR156Q8NFN8 814 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 OR7D4Q8NG98 312 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 OR2W6PQ8NHA6 318 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 UHRF1Q96T88 793 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 ZSWIM4Q9H7M6 989 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 DPP7Q9UHL4 492 aa3.99□□□□□ -1.77
ECHDC1-219ENST00000526299 CKBP12277 381 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 ATP5JP18859 108 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 FOLR3P41439 243 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 SP140Q13342 867 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 Q6ZVL8 140 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 AMIGO2Q86SJ2 522 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 PEG10Q86TG7 708 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 COLGALT2Q8IYK4 626 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 SLC5A5Q92911 643 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 BCO1Q9HAY6 547 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 EMC7Q9NPA0 242 aa3.98□□□□□ -1.77
ECHDC1-219ENST00000526299 TRIM38O00635 465 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 PRKCGP05129 697 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 ELFN1P0C7U0 828 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 WT1P19544 449 aaPredicted RBP3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 MAPK10P53779 464 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 SF3A1Q15459 793 aaKnown RBP3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 MTX3Q5HYI7 312 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 KIAA0895LQ68EN5 471 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 C11orf87Q6NUJ2 197 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 FAM180AQ6UWF9 173 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 PQLC1Q8N2U9 271 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 NINJ1Q92982 152 aa3.97□□□□□ -1.77
ECHDC1-219ENST00000526299 MARS2Q96GW9 593 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms