RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CYB5RLQ6IPT4 315 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 ZNF627Q7L945 461 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 LDLRAD3Q86YD5 345 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 RAVER1Q8IY67 606 aaKnown RBP4.98□□□□□ -1.61
CD44-219ENST00000525685 CMTR2Q8IYT2 770 aaKnown RBP4.98□□□□□ -1.61
CD44-219ENST00000525685 PQLC1Q8N2U9 271 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 SENP6Q9GZR1 1112 aaPredicted RBP4.98□□□□□ -1.61
CD44-219ENST00000525685 TUBD1Q9UJT1 453 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 REXO2Q9Y3B8 237 aaKnown RBP4.98□□□□□ -1.61
CD44-219ENST00000525685 WDR33Q9C0J8 1336 aaKnown RBP4.97□□□□□ -1.61
CD44-219ENST00000525685 CCDC154A6NI56 674 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 FAM20BO75063 409 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 TMEM127O75204 238 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 ITGA10O75578 1167 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 GASTP01350 101 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 U2AF1L5P0DN76 240 aaPredicted RBP4.97□□□□□ -1.61
CD44-219ENST00000525685 CYP2C19P33261 490 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 U2AF1Q01081 240 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD44-219ENST00000525685 MRPL49Q13405 166 aaKnown RBP4.97□□□□□ -1.61
CD44-219ENST00000525685 CRB2Q5IJ48 1285 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 IFIT1BQ5T764 474 aaKnown RBP4.97□□□□□ -1.61
CD44-219ENST00000525685 MDM1Q8TC05 714 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 CCHCR1Q8TD31 782 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 IKZF4Q9H2S9 585 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 MANSC1Q9H8J5 431 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 TDP1Q9NUW8 608 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 TMEM140Q9NV12 185 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 GPRC5DQ9NZD1 345 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 PCDHA13Q9Y5I0 950 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 EFCAB5A4FU69 1503 aa4.97□□□□□ -1.61
CD44-219ENST00000525685 TNIKQ9UKE5 1360 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 GOLGA6CA6NDK9 693 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 GOLGA6BA6NDN3 693 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 MARCH6O60337 910 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 OFD1O75665 1012 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 RPS6KA4O75676 772 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 ABLIM3O94929 683 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 SCGB1D2O95969 90 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 HSPA6P17066 643 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 HK1P19367 917 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 INHBCP55103 352 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 PURAQ00577 322 aaKnown RBP4.96□□□□□ -1.62
CD44-219ENST00000525685 APBA1Q02410 837 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 LRRC41Q15345 812 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 NFE2Q16621 373 aaPredicted RBP4.96□□□□□ -1.62
CD44-219ENST00000525685 METTL24Q5JXM2 366 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 Q6ZPA2 131 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 TPH2Q8IWU9 490 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 ULK2Q8IYT8 1036 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 MYO1HQ8N1T3 1032 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 FBXO18Q8NFZ0 1043 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 COA7Q96BR5 231 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 IL17RAQ96F46 866 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 PDCD2LQ9BRP1 358 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 LSM14BQ9BX40 385 aaKnown RBP4.96□□□□□ -1.62
CD44-219ENST00000525685 CPEB1Q9BZB8 566 aaKnown RBP4.96□□□□□ -1.62
CD44-219ENST00000525685 CDH19Q9H159 772 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 BCO1Q9HAY6 547 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 GOLGA6AQ9NYA3 693 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 PNMA8BQ9ULN7 279 aaPredicted RBP4.96□□□□□ -1.62
CD44-219ENST00000525685 ABCC2Q92887 1545 aa4.96□□□□□ -1.62
CD44-219ENST00000525685 AP1G1O43747 822 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 ATF3P18847 181 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 KRT4P19013 534 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 PDCP20941 246 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 AKAP5P24588 427 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 CRHR1P34998 444 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 GZMKP49863 264 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 PPP3CAQ08209 521 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 MGAT2Q10469 447 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 ATP2B3Q16720 1220 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 MST1LQ2TV78 715 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 GADL1Q6ZQY3 521 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 RHOUQ7L0Q8 258 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 MRGPREQ86SM8 312 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 DRC7Q8IY82 874 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 GRAMD1CQ8IYS0 662 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 ZNF276Q8N554 614 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 OR7D4Q8NG98 312 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 OR52N2Q8NGI0 321 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 SLC25A43Q8WUT9 341 aaPredicted RBP4.95□□□□□ -1.62
CD44-219ENST00000525685 STON2Q8WXE9 905 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 LENG9Q96B70 501 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 MAP3K14Q99558 947 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
CD44-219ENST00000525685 CPPED1Q9BRF8 314 aaPredicted RBP4.95□□□□□ -1.62
CD44-219ENST00000525685 RTFDC1Q9BY42 306 aaPredicted RBP4.95□□□□□ -1.62
CD44-219ENST00000525685 RHOBTB2Q9BYZ6 727 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 LDAHQ9H6V9 325 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 NRDE2Q9H7Z3 1164 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 TCF7L1Q9HCS4 588 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 LANCL2Q9NS86 450 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 CHPF2Q9P2E5 772 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 PTPRGP23470 1445 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 ABCA8O94911 1581 aa4.95□□□□□ -1.62
CD44-219ENST00000525685 UHRF1BP1LA0JNW5 1464 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 MAPKBP1O60336 1514 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 A0A087X1B8 175 aa4.94□□□□□ -1.62
CD44-219ENST00000525685 OVOL3O00110 214 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms