RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 POMCP01189 267 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 RPLP2P05387 115 aaKnown RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 PFKMP08237 780 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 NFICP08651 508 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TRIM49P0CI25 452 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TRIM49CP0CI26 452 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 ITGA4P13612 1032 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 GARTP22102 1010 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 BMP8BP34820 402 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 MATR3P43243 847 aaKnown RBP eCLIP7.06□□□□□ -1.28
CD44-214ENST00000525211 PAK1Q13153 545 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 ALCAMQ13740 583 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 ZBTB6Q15916 424 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 SKOR2Q2VWA4 1001 aaPredicted RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 XKR4Q5GH76 650 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 CEP135Q66GS9 1140 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 JADE1Q6IE81 842 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 SASS6Q6UVJ0 657 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TMEM173Q86WV6 379 aaPredicted RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 NPAS4Q8IUM7 802 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 HERC6Q8IVU3 1022 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 AOPEPQ8N6M6 819 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 MLKLQ8NB16 471 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 C3orf58Q8NDZ4 430 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 APBB2Q92870 758 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 DHTKD1Q96HY7 919 aaPredicted RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 RNPC3Q96LT9 517 aaKnown RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 SRRTQ9BXP5 876 aaKnown RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 NRDE2Q9H7Z3 1164 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TMEM206Q9H813 350 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 CBX8Q9HC52 389 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.06□□□□□ -1.285e-38■■■■■ 698.7
CD44-214ENST00000525211 TMEM161AQ9NX61 479 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 TUBGCP4Q9UGJ1 667 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 RWDD2AQ9UIY3 292 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 HOOK1Q9UJC3 728 aaKnown RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 MRPL42Q9Y6G3 142 aaKnown RBP7.06□□□□□ -1.28
CD44-214ENST00000525211 TRIOBPQ9H2D6 2365 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 CHD7Q9P2D1 2997 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 ANK1P16157 1881 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 A0A0C4DFX4 3053 aa7.06□□□□□ -1.28
CD44-214ENST00000525211 FNDC1Q4ZHG4 1894 aaPredicted RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 GBF1Q92538 1859 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 SMIM28A0A1B0GU29 152 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 LRRIQ3A6PVS8 624 aaPredicted RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 NT5C1B-RDH14C9J2C7 533 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 H0YCG3 227 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 INPPL1O15357 1258 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 BAIAP3O94812 1187 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 GJB5O95377 273 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 VNN1O95497 513 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 ITGB1P05556 798 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 CLTAP09496 248 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 ATP1A3P13637 1013 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 ATP2A2P16615 1042 aaKnown RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 NR2F2P24468 414 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 ZNF445P59923 1031 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 HTRA4P83105 476 aaPredicted RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 LSM11P83369 360 aaKnown RBP eCLIP7.05□□□□□ -1.28
CD44-214ENST00000525211 APBA1Q02410 837 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 CYP24A1Q07973 514 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 PPP3CAQ08209 521 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 ADAM9Q13443 819 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 STX1AQ16623 288 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 NFIL3Q16649 462 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 QPCTQ16769 361 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 DCAF4L1Q3SXM0 396 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 NOMO2Q5JPE7 1267 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 PPP2R2DQ66LE6 453 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 PSRC1Q6PGN9 363 aaPredicted RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 ADGRD1Q6QNK2 874 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 APTXQ7Z2E3 356 aaKnown RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 LUZP1Q86V48 1076 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 SLC9A9Q8IVB4 645 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 BRSK2Q8IWQ3 736 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 GPD1LQ8N335 351 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 XXYLT1Q8NBI6 393 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 CCDC47Q96A33 483 aaKnown RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 CCDC51Q96ER9 411 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 LRCH3Q96II8 777 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 MFSD14AQ96MC6 490 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 ACAP3Q96P50 834 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 PPP1R10Q96QC0 940 aaKnown RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 VN1R3Q9BXE9 311 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 FTHL17Q9BXU8 183 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 RBSNQ9H1K0 784 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 NKX2-4Q9H2Z4 354 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 ELAC1Q9H777 363 aaKnown RBP7.05□□□□□ -1.28
CD44-214ENST00000525211 CERS4Q9HA82 394 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 RSAD1Q9HA92 442 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 C1orf112Q9NSG2 853 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 TBC1D13Q9NVG8 400 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 ANO10Q9NW15 660 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 FANCLQ9NW38 375 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 CNTN3Q9P232 1028 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 SIX4Q9UIU6 781 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 EXOC7Q9UPT5 735 aa7.05□□□□□ -1.28
CD44-214ENST00000525211 PCDHB7Q9Y5E2 793 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms