RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 PHKA2P46019 1235 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 GPC5P78333 572 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 ITIH3Q06033 890 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 NCOA4Q13772 614 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 RASAL3Q86YV0 1011 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 FDXACB1Q9BRP7 624 aaPredicted RBP16.41■□□□□ 0.22
BEST1-204ENST00000524926 OGFRQ9NZT2 677 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 CTTNBP2NLQ9P2B4 639 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 CPSF3Q9UKF6 684 aaKnown RBP16.41■□□□□ 0.22
BEST1-204ENST00000524926 VTNP04004 478 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 MMP3P08254 477 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 IQCF3P0C7M6 154 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 CBX1P83916 185 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 TNFAIP2Q03169 654 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 DGKDQ16760 1214 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 WDR49Q8IV35 697 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 RHOT2Q8IXI1 618 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 IFT122Q9HBG6 1241 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 APOBEC3GQ9HC16 384 aaKnown RBP16.41■□□□□ 0.22
BEST1-204ENST00000524926 PTPRHQ9HD43 1115 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 AMFRQ9UKV5 643 aa16.41■□□□□ 0.22
BEST1-204ENST00000524926 MANSC4A6NHS7 340 aaPredicted RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 PROZP22891 400 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 AP3M2P53677 418 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 CUL2Q13617 745 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 EEF1DP3Q658K8 133 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 MTHFD1LQ6UB35 978 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 NT5DC3Q86UY8 548 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 MMGT1Q8N4V1 131 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 DDX1Q92499 740 aaKnown RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 IMPG2Q9BZV3 1241 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 MTMR12Q9C0I1 747 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 PRMT7Q9NVM4 692 aaPredicted RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 COG5Q9UP83 839 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 ADCY6O43306 1168 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 CST3P01034 146 aaPredicted RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 NOP14P78316 857 aaKnown RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 MAP2K5Q13163 448 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 DUOXA2Q1HG44 320 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 LONRF2Q1L5Z9 754 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 WDR93Q6P2C0 686 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 CEP120Q8N960 986 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 HNRNPLLQ8WVV9 542 aaKnown RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 NFKBIZQ9BYH8 718 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 ABCB6Q9NP58 842 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 RBM12Q9NTZ6 932 aaKnown RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 CHORDC1Q9UHD1 332 aaPredicted RBP16.4■□□□□ 0.22
BEST1-204ENST00000524926 NUB1Q9Y5A7 615 aa16.4■□□□□ 0.22
BEST1-204ENST00000524926 CEP104O60308 925 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 ZMYND10O75800 440 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 TFAMQ00059 246 aaKnown RBP16.39■□□□□ 0.21
BEST1-204ENST00000524926 GRM1Q13255 1194 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 SURF1Q15526 300 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 GRIK4Q16099 956 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 NLRP7Q8WX94 980 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 PBKQ96KB5 322 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 SCLT1Q96NL6 688 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 HINFPQ9BQA5 517 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 LRRC1Q9BTT6 524 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 SELENOOQ9BVL4 669 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 TNFSF13BQ9Y275 285 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 STXBP5LQ9Y2K9 1186 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 PCDHB4Q9Y5E5 795 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 PCDHB2Q9Y5E7 798 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 DOCK3Q8IZD9 2030 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 COL1A2P08123 1366 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 TARSL2A2RTX5 802 aaKnown RBP16.39■□□□□ 0.21
BEST1-204ENST00000524926 CLTAP09496 248 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 MCM3P25205 808 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 BPIFB4P59827 614 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 MORN1Q5T089 497 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 TMEM270Q6UE05 265 aa16.39■□□□□ 0.21
BEST1-204ENST00000524926 MSL3Q8N5Y2 521 aaKnown RBP16.39■□□□□ 0.21
BEST1-204ENST00000524926 ATMINO43313 823 aaPredicted RBP16.38■□□□□ 0.21
BEST1-204ENST00000524926 TBXAS1P24557 533 aaPredicted RBP16.38■□□□□ 0.21
BEST1-204ENST00000524926 MRPS25P82663 173 aaKnown RBP16.38■□□□□ 0.21
BEST1-204ENST00000524926 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 BEND6Q5SZJ8 279 aaPredicted RBP16.38■□□□□ 0.21
BEST1-204ENST00000524926 RGMBQ6NW40 437 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 LINC01465Q8N7H1 131 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 CDT1Q9H211 546 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 UMODL1Q5DID0 1318 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 CES2O00748 559 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 ZEB2O60315 1214 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 TBC1D8O95759 1140 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 TMEM191BP0C7N4 346 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 TRPC3Q13507 836 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 ACAD10Q6JQN1 1059 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 SAPCD2Q86UD0 394 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 HES6Q96HZ4 224 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 RPF1Q9H9Y2 349 aaKnown RBP16.38■□□□□ 0.21
BEST1-204ENST00000524926 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
BEST1-204ENST00000524926 GPR25O00155 361 aa16.37■□□□□ 0.21
BEST1-204ENST00000524926 ATP8B1O43520 1251 aa16.37■□□□□ 0.21
BEST1-204ENST00000524926 CYP2B6P20813 491 aa16.37■□□□□ 0.21
BEST1-204ENST00000524926 ACO1P21399 889 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms