RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TSPEARQ8WU66 669 aa2.5□□□□□ -2.01
CD44-212ENST00000524922 FERMT2Q96AC1 680 aa2.5□□□□□ -2.01
CD44-212ENST00000524922 MRFAP1L1Q96HT8 127 aa2.5□□□□□ -2.01
CD44-212ENST00000524922 GPR101Q96P66 508 aaPredicted RBP2.5□□□□□ -2.01
CD44-212ENST00000524922 KCTD10Q9H3F6 313 aa2.5□□□□□ -2.01
CD44-212ENST00000524922 TOPORSQ9NS56 1045 aaPredicted RBP2.5□□□□□ -2.01
CD44-212ENST00000524922 FANCLQ9NW38 375 aa2.5□□□□□ -2.01
CD44-212ENST00000524922 GPRC5DQ9NZD1 345 aa2.5□□□□□ -2.01
CD44-212ENST00000524922 COL3A1P02461 1466 aaPredicted RBP2.5□□□□□ -2.01
CD44-212ENST00000524922 RTEL1-TNFRSF6BF6WH68 1400 aa2.5□□□□□ -2.01
CD44-212ENST00000524922 SCAPERQ9BY12 1400 aa2.5□□□□□ -2.01
CD44-212ENST00000524922 VWDEQ8N2E2 1590 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 ATP7AQ04656 1500 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 ST20-MTHFSA0A0A6YYL1 179 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 PLEKHD1A6NEE1 506 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 UNC119BA6NIH7 251 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 DRGXA6NNA5 263 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 PRR5-ARHGAP8B1AHC4 643 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 MASP2O00187 686 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 MGST3O14880 152 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 GASTP01350 101 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 LPLP06858 475 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 ALOX15P16050 662 aaPredicted RBP2.49□□□□□ -2.01
CD44-212ENST00000524922 DDX6P26196 483 aaKnown RBP eCLIP2.49□□□□□ -2.01
CD44-212ENST00000524922 HSPA1LP34931 641 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 CRHR1P34998 444 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 FLT3LGP49771 235 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 EFCAB2Q5VUJ9 269 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 CNNM4Q6P4Q7 775 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 LMBR1LQ6UX01 489 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 ZNF572Q7Z3I7 529 aaPredicted RBP2.49□□□□□ -2.01
CD44-212ENST00000524922 HOMER1Q86YM7 354 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 DHX37Q8IY37 1157 aaKnown RBP2.49□□□□□ -2.01
CD44-212ENST00000524922 TRMT2AQ8IZ69 625 aaKnown RBP2.49□□□□□ -2.01
CD44-212ENST00000524922 PPM1KQ8N3J5 372 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 REPS2Q8NFH8 660 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 MDM1Q8TC05 714 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 ANKS1AQ92625 1134 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 SLC5A5Q92911 643 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 ORAI2Q96SN7 254 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 KLHL11Q9NVR0 708 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 FAM30AQ9NZY2 134 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 PTGFRNQ9P2B2 879 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 ZNHIT2Q9UHR6 403 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 CLCA2Q9UQC9 943 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 MAP3K2Q9Y2U5 619 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 PLEKHH2Q8IVE3 1493 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 C3P01024 1663 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 CTTNBP2Q8WZ74 1663 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 MYO3AQ8NEV4 1616 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 NEURL4Q96JN8 1562 aa2.49□□□□□ -2.01
CD44-212ENST00000524922 SIGLEC1Q9BZZ2 1709 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 SPATA31A6Q5VVP1 1343 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 ZNF335Q9H4Z2 1342 aaPredicted RBP2.48□□□□□ -2.01
CD44-212ENST00000524922 PZPP20742 1482 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 NKTRP30414 1462 aaKnown RBP2.48□□□□□ -2.01
CD44-212ENST00000524922 CXorf49A8MYA2 514 aaPredicted RBP2.48□□□□□ -2.01
CD44-212ENST00000524922 PJA2O43164 708 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 PRSS23O95084 383 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 ESRRBO95718 433 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 RBP3P10745 1247 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 GUCY1A2P33402 732 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 PLA2G5P39877 138 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 ID4P47928 161 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 CHN2P52757 468 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 LGALS4P56470 323 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 NRG3P56975 720 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 PPP3CAQ08209 521 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 FSCN1Q16658 493 aaKnown RBP2.48□□□□□ -2.01
CD44-212ENST00000524922 CT83Q5H943 113 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 FAM47AQ5JRC9 791 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 ABHD17BQ5VST6 288 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 FBXO42Q6P3S6 717 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 SYCE2Q6PIF2 218 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 KCNK18Q7Z418 384 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 GPR149Q86SP6 731 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 RNF180Q86T96 592 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 PASD1Q8IV76 773 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 RHOT2Q8IXI1 618 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 CMIPQ8IY22 773 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 CMTR2Q8IYT2 770 aaKnown RBP2.48□□□□□ -2.01
CD44-212ENST00000524922 CLRN3Q8NCR9 226 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 NACC2Q96BF6 587 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 EAF2Q96CJ1 260 aaPredicted RBP2.48□□□□□ -2.01
CD44-212ENST00000524922 MFSD3Q96ES6 412 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 FEZ1Q99689 392 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 LRFN3Q9BTN0 628 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 CYP4F11Q9HBI6 524 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 SPON1Q9HCB6 807 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 FOXJ2Q9P0K8 574 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 EDARQ9UNE0 448 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 SIK3Q9Y2K2 1263 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 MRPL42Q9Y6G3 142 aaKnown RBP2.48□□□□□ -2.01
CD44-212ENST00000524922 FPGT-TNNI3KV9GXZ4 949 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 EEA1Q15075 1411 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 FMN1Q68DA7 1419 aa2.48□□□□□ -2.01
CD44-212ENST00000524922 ABCC1P33527 1531 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 LRRC7Q96NW7 1537 aa2.47□□□□□ -2.01
CD44-212ENST00000524922 NCOA2Q15596 1464 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms