RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 FZD1Q9UP38 647 aa8.17□□□□□ -1.1
CTR9-202ENST00000524523 JRKLQ9Y4A0 524 aa8.17□□□□□ -1.1
CTR9-202ENST00000524523 PCDHA13Q9Y5I0 950 aa8.17□□□□□ -1.1
CTR9-202ENST00000524523 MRFAP1Q9Y605 127 aa8.17□□□□□ -1.1
CTR9-202ENST00000524523 EMSYQ7Z589 1322 aa8.17□□□□□ -1.1
CTR9-202ENST00000524523 A0A0A6YYK5 440 aaPredicted RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 IGKV6-21A0A0C4DH24 114 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 A0A0U1RQG5 324 aaPredicted RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 GSTTP1A0A1W2PQM5 241 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 CLIC2O15247 247 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 HBP1O60381 514 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 TACC1O75410 805 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 URI1O94763 535 aaPredicted RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 UBA1P22314 1058 aaKnown RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 MAPK4P31152 587 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 EIF4A3P38919 411 aaKnown RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 CASP4P49662 377 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 POLGP54098 1239 aaPredicted RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 NPEPPSP55786 919 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 CDC42EP1Q00587 391 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 CTBSQ01459 385 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 KLHL30Q0D2K2 578 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 STRN3Q13033 797 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 GRM1Q13255 1194 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 PTPN21Q16825 1174 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 ZNF792Q3KQV3 632 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 EAPPQ56P03 285 aaPredicted RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 ZNF569Q5MCW4 686 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 ZPBP2Q6X784 338 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 ALDH16A1Q8IZ83 802 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 SMCR8Q8TEV9 937 aaPredicted RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 LMBR1Q8WVP7 490 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 ACDQ96AP0 544 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 FAXDC2Q96IV6 333 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 SPAG5Q96R06 1193 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 WDR24Q96S15 920 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 DESI2Q9BSY9 194 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 NFKBIZQ9BYH8 718 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 C2orf40Q9H1Z8 148 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 GBA2Q9HCG7 927 aaPredicted RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 LZTFL1Q9NQ48 299 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 HSPBP1Q9NZL4 362 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 APEX2Q9UBZ4 518 aa8.16□□□□□ -1.1
CTR9-202ENST00000524523 REXO2Q9Y3B8 237 aaKnown RBP8.16□□□□□ -1.1
CTR9-202ENST00000524523 DENND3A2RUS2 1198 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 ZNF233A6NK53 670 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 CCDC169A6NNP5 214 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 K7ERI5 159 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 PDHXO00330 501 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 CES2O00748 559 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 EPHB6O15197 1021 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 SLC16A4O15374 487 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 MAGEB2O15479 319 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 EXTL3O43909 919 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 TLR2O60603 784 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 PPFIA4O75335 1185 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 ARHGEF15O94989 841 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 MAGEA1P43355 309 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 KLK7P49862 253 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 GPC3P51654 580 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 EMC2Q15006 297 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 TCEAL1Q15170 157 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 SURF1Q15526 300 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 NAB2Q15742 525 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 ASIC2Q16515 512 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 HIF1AQ16665 826 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 FAM110CQ1W6H9 321 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 ZNF484Q5JVG2 852 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 TCERG1LQ5VWI1 586 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 IQSEC1Q6DN90 963 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 SEPT14Q6ZU15 432 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 SRGAP1Q7Z6B7 1085 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 GPD1LQ8N335 351 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 ACRBPQ8NEB7 543 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 LMO3Q8TAP4 145 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 PARD3BQ8TEW8 1205 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 ATP8B4Q8TF62 1192 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 UBXN4Q92575 508 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 RABGGTAQ92696 567 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 SECISBP2LQ93073 1101 aaKnown RBP8.15□□□□□ -1.1
CTR9-202ENST00000524523 FGD4Q96M96 766 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 ALS2CR12Q96Q35 445 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 PARK7Q99497 189 aaKnown RBP8.15□□□□□ -1.1
CTR9-202ENST00000524523 GPR20Q99678 358 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 PAGR1Q9BTK6 254 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 TMEM8AQ9HCN3 771 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 TXNRD2Q9NNW7 524 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 SIX2Q9NPC8 291 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 XPNPEP1Q9NQW7 623 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 GCNT4Q9P109 453 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 GDF2Q9UK05 429 aaPredicted RBP8.15□□□□□ -1.1
CTR9-202ENST00000524523 ZNF215Q9UL58 517 aaPredicted RBP8.15□□□□□ -1.1
CTR9-202ENST00000524523 IVNS1ABPQ9Y6Y0 642 aa8.15□□□□□ -1.1
CTR9-202ENST00000524523 COL1A2P08123 1366 aa8.14□□□□□ -1.11
CTR9-202ENST00000524523 POLR2AP24928 1970 aaKnown RBP8.14□□□□□ -1.11
CTR9-202ENST00000524523 GOLGB1Q14789 3259 aaKnown RBP8.14□□□□□ -1.11
CTR9-202ENST00000524523 PTPRFP10586 1907 aa8.14□□□□□ -1.11
CTR9-202ENST00000524523 SLC15A5A6NIM6 579 aa8.14□□□□□ -1.11
CTR9-202ENST00000524523 NOP56O00567 594 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms