RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	MCL1	Q07820	350 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	MTMR3	Q13615	1198 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	UPP1	Q16831	310 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	XKR4	Q5GH76	650 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	SPECC1	Q5M775	1068 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	LIN9	Q5TKA1	542 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	RRAGB	Q5VZM2	374 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	FAM173B	Q6P4H8	233 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	ALKAL1	Q6UXT8	129 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	TRIM67	Q6ZTA4	783 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	STAM	Q92783	540 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	EPSTI1	Q96J88	318 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	ZBTB45	Q96K62	511 aa	Predicted RBP	13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	MFSD14A	Q96MC6	490 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	GOLGA2P5	Q9HBQ8	144 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	ZDHHC7	Q9NXF8	308 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	CNTN3	Q9P232	1028 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	TBX20	Q9UMR3	447 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	SORCS3	Q9UPU3	1222 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	MTMR6	Q9Y217	621 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	NUB1	Q9Y5A7	615 aa		13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	13.76	□□□□□ -0.21
RBBP4-215	ENST00000524393	ABLIM1	O14639	778 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	SPATA31D3	P0C874	917 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	RPL9	P32969	192 aa	Known RBP	13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	ZNF131	P52739	623 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	SIGLEC14	Q08ET2	396 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	STK38	Q15208	465 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	CCDC73	Q6ZRK6	1079 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	SPATA31D4	Q6ZUB0	917 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	ANKS3	Q6ZW76	656 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	ZDHHC14	Q8IZN3	488 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	KREMEN2	Q8NCW0	462 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	LNX1	Q8TBB1	728 aa	Predicted RBP	13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	SMG7	Q92540	1137 aa	Known RBP	13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	KCNN1	Q92952	543 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	ZNF396	Q96N95	335 aa	Predicted RBP	13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	USP28	Q96RU2	1077 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	RHOBTB2	Q9BYZ6	727 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	PLEKHA5	Q9HAU0	1116 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	RAPGEFL1	Q9UHV5	662 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	DENND4A	Q7Z401	1863 aa		13.75	□□□□□ -0.21
RBBP4-215	ENST00000524393	TMEM221	A6NGB7	291 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393		M0R296	226 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	PODXL	O00592	558 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	XPOT	O43592	962 aa	Known RBP	13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	RFPL2	O75678	378 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	CLTA	P09496	248 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	MYB	P10242	640 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	FGFR3	P22607	806 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	STAT6	P42226	847 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	PPP2R3A	Q06190	1150 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	SLC39A14	Q15043	492 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	SEZ6	Q53EL9	994 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	LILRA6	Q6PI73	481 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	SV2B	Q7L1I2	683 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	SUGP1	Q8IWZ8	645 aa	Known RBP	13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	UBALD2	Q8IYN6	164 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	PBXIP1	Q96AQ6	731 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	CLIC6	Q96NY7	704 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	CLSTN3	Q9BQT9	956 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	CIT	O14578	2027 aa		13.74	□□□□□ -0.21
RBBP4-215	ENST00000524393	CLUH	O75153	1309 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	OGT	O15294	1046 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	ZMYND10	O75800	440 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	PIGR	P01833	764 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	GBP2	P32456	591 aa	Predicted RBP	13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	SOX4	Q06945	474 aa	Predicted RBP	13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	PPM1L	Q5SGD2	360 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	HFE2	Q6ZVN8	426 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	USP49	Q70CQ1	688 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	DYM	Q7RTS9	669 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	BMP8A	Q7Z5Y6	402 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	LRRC15	Q8TF66	581 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	FAM122A	Q96E09	287 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	ZMAT2	Q96NC0	199 aa	Known RBP	13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	MSTO1	Q9BUK6	570 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	PRKD2	Q9BZL6	878 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	WDR6	Q9NNW5	1121 aa	Known RBP	13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	MTRR	Q9UBK8	725 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	SEL1L	Q9UBV2	794 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	LIMD1	Q9UGP4	676 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	FBXW11	Q9UKB1	542 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	GTF3C3	Q9Y5Q9	886 aa		13.73	□□□□□ -0.21
RBBP4-215	ENST00000524393	C2orf16	Q68DN1	1984 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	MYH15	Q9Y2K3	1946 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393		H7C4K7	107 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	SYN3	O14994	580 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	XYLB	O75191	536 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	CXCL8	P10145	99 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	GAP43	P17677	238 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	TKT	P29401	623 aa	Known RBP	13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	NMT1	P30419	496 aa	Known RBP	13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	MCM4	P33991	863 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	OR1D2	P34982	312 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	BRCC3	P46736	316 aa		13.72	□□□□□ -0.21
RBBP4-215	ENST00000524393	NASP	P49321	788 aa	Predicted RBP	13.72	□□□□□ -0.21

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