RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 YIPF3Q9GZM5 350 aa10.93□□□□□ -0.66
SPIDR-225ENST00000524141 DNAJC17Q9NVM6 304 aaKnown RBP10.93□□□□□ -0.66
SPIDR-225ENST00000524141 NKX1-2Q9UD57 310 aaPredicted RBP10.93□□□□□ -0.66
SPIDR-225ENST00000524141 CHKBQ9Y259 395 aa10.93□□□□□ -0.66
SPIDR-225ENST00000524141 ARHGEF35A5YM69 484 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 K7ENM7 598 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 CYP26A1O43174 497 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 CHMP2AO43633 222 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 GAS7O60861 476 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ATP4AP20648 1035 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 TARSP26639 723 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 MAPK4P31152 587 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 CTCFP49711 727 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 GTF2IP78347 998 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 IKQ13123 557 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 LBRQ14739 615 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 RBBP5Q15291 538 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 TMED2Q15363 201 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 PDK4Q16654 411 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 SGSM1Q2NKQ1 1148 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 GRIPAP1Q4V328 841 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 SLC47A2Q86VL8 602 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 PPM1KQ8N3J5 372 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 XXYLT1Q8NBI6 393 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ASAP3Q8TDY4 903 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 MAML1Q92585 1016 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 SLC5A5Q92911 643 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 TTC25Q96NG3 672 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 PAIP2Q9BPZ3 127 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 TBC1D10AQ9BXI6 508 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 DCLRE1BQ9H816 532 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 PPCSQ9HAB8 311 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 LARSQ9P2J5 1176 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 RBBP6Q7Z6E9 1792 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 EXOC1LA0A1B0GW35 172 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 CETPP11597 493 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 CYP11B1P15538 503 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 SNRPFP62306 86 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 TMEM63BQ5T3F8 832 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ACAD10Q6JQN1 1059 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 TRABD2AQ86V40 505 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 LARGE2Q8N3Y3 721 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 LRRC8CQ8TDW0 803 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ATG4AQ8WYN0 398 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 GMCL1Q96IK5 515 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ACCSQ96QU6 501 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 KIAA1683Q9H0B3 1180 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 HAO1Q9UJM8 370 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ANAPC7Q9UJX3 599 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ZNF536O15090 1300 aa10.92□□□□□ -0.66
SPIDR-225ENST00000524141 ZNFX1Q9P2E3 1918 aaKnown RBP10.92□□□□□ -0.66
SPIDR-225ENST00000524141 FOXO6A8MYZ6 492 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 EDF1O60869 148 aaKnown RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 BBOX1O75936 387 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 NPTXRO95502 500 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 HOXA13P31271 388 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 KLC1Q07866 573 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 PTP4A2Q12974 167 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 DNAJC3Q13217 504 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 TRIP13Q15645 432 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 ANO7Q6IWH7 933 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 SEPT14Q6ZU15 432 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 APBB1IPQ7Z5R6 666 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 CPNE8Q86YQ8 564 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 ZCCHC9Q8N567 271 aaKnown RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 GMCL1P1Q8NEA9 526 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 CERKQ8TCT0 537 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 ZNF398Q8TD17 642 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 TRIM11Q96F44 468 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 RBM17Q96I25 401 aaKnown RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 ENO4A6NNW6 628 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 ZBTB39O15060 712 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 TOM1O60784 492 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 RNASELQ05823 741 aaKnown RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 ADCY1Q08828 1119 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 CCNG2Q16589 344 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 CRY2Q49AN0 593 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 CERKLQ49MI3 558 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 SLC45A4Q5BKX6 768 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 IZUMO3Q5VZ72 239 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 SLC30A9Q6PML9 568 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 NSMFQ6X4W1 530 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 LONP2Q86WA8 852 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 DENND1AQ8TEH3 1009 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 KREMEN1Q96MU8 473 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 SMC6Q96SB8 1091 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 RBM15Q96T37 977 aaKnown RBP eCLIP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 TSC22D3Q99576 134 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 WDR18Q9BV38 432 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 AVENQ9NQS1 362 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-225ENST00000524141 SAR1AQ9NR31 198 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 STOML1Q9UBI4 398 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 POLLQ9UGP5 575 aa10.91□□□□□ -0.66
SPIDR-225ENST00000524141 LNPEPQ9UIQ6 1025 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms