RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 KDM4CQ9H3R0 1056 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 SLC40A1Q9NP59 571 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 CHST7Q9NS84 486 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 KLC4Q9NSK0 619 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
HDAC9-228ENST00000524023 CTDP1Q9Y5B0 961 aaPredicted RBP11.84□□□□□ -0.51
HDAC9-228ENST00000524023 MROH7Q68CQ1 1323 aa11.83□□□□□ -0.51
HDAC9-228ENST00000524023 ZBED4O75132 1171 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 ITIH2P19823 946 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 SCTRP47872 440 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
HDAC9-228ENST00000524023 BRDTQ58F21 947 aaPredicted RBP11.83□□□□□ -0.52
HDAC9-228ENST00000524023 C15orf39Q6ZRI6 1047 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 TAOK1Q7L7X3 1001 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 PIGWQ7Z7B1 504 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 LRRC34Q8IZ02 419 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 MAIP1Q8WWC4 291 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 CPA5Q8WXQ8 436 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 FAM84AQ96KN4 292 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 FAM81BQ96LP2 452 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 PRMT1Q99873 361 aaKnown RBP11.83□□□□□ -0.52
HDAC9-228ENST00000524023 FAM213AQ9BRX8 229 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 DDX23Q9BUQ8 820 aaKnown RBP11.83□□□□□ -0.52
HDAC9-228ENST00000524023 MYPNQ86TC9 1320 aa11.83□□□□□ -0.52
HDAC9-228ENST00000524023 MYBL1P10243 752 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 GHRP10912 638 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 RRM1P23921 792 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 IVDP26440 423 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 PTK6Q13882 451 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 XRRA1Q6P2D8 792 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 SYDE1Q6ZW31 735 aaPredicted RBP11.82□□□□□ -0.52
HDAC9-228ENST00000524023 TAS1R3Q7RTX0 852 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 EXOC3L1Q86VI1 746 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 ZNF677Q86XU0 584 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 ATG4AQ8WYN0 398 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 GPRASP2Q96D09 838 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 SNF8Q96H20 258 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 HERPUD2Q9BSE4 406 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 DCLK3Q9C098 648 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 PDLIM7Q9NR12 457 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 C1orf112Q9NSG2 853 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 ASIC3Q9UHC3 531 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 ZNRF3Q9ULT6 936 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 PCDHB2Q9Y5E7 798 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 DOCK5Q9H7D0 1870 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 PARP14Q460N5 1801 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 CCT8L1PA6NM43 557 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 DGAT1O75907 488 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 ACSL3O95573 720 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 NR3C2P08235 984 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 CCND2P30279 289 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 MAN1A1P33908 653 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 CHKAP35790 457 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 SLC1A1P43005 524 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 RTP1P59025 263 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 BAATQ14032 418 aaPredicted RBP11.82□□□□□ -0.52
HDAC9-228ENST00000524023 CNGA2Q16280 664 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 LONRF1Q17RB8 773 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 CCDC38Q502W7 563 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 PHLDB2Q86SQ0 1253 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 ANKS4BQ8N8V4 417 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 MCPH1Q8NEM0 835 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 GRK7Q8WTQ7 553 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 ATP6V0A1Q93050 837 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 TRIM11Q96F44 468 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 BICD1Q96G01 975 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 DDX27Q96GQ7 796 aaKnown RBP11.82□□□□□ -0.52
HDAC9-228ENST00000524023 TEPSINQ96N21 525 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 MTFR1LQ9H019 292 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 CCDC113Q9H0I3 377 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 RPAP3Q9H6T3 665 aaPredicted RBP11.82□□□□□ -0.52
HDAC9-228ENST00000524023 XPNPEP1Q9NQW7 623 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
HDAC9-228ENST00000524023 VWA5AO00534 786 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 ATP2C2O75185 946 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 KCNA2P16389 499 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 CENPCQ03188 943 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 MTMR2Q13614 643 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 ITIH4Q14624 930 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 LMBRD2Q68DH5 695 aaPredicted RBP11.81□□□□□ -0.52
HDAC9-228ENST00000524023 LLGL2Q6P1M3 1020 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 NIM1KQ8IY84 436 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 WNK4Q96J92 1243 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 SERPINB12Q96P63 405 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 MYOZ2Q9NPC6 264 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 RNF146Q9NTX7 359 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 ARHGAP28Q9P2N2 729 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC9-228ENST00000524023 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 MAFGO15525 162 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 DKC1O60832 514 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDAC9-228ENST00000524023 CYP1A1P04798 512 aaPredicted RBP11.81□□□□□ -0.52
HDAC9-228ENST00000524023 VIMP08670 466 aaKnown RBP11.81□□□□□ -0.52
HDAC9-228ENST00000524023 NSFP46459 744 aaKnown RBP11.81□□□□□ -0.52
HDAC9-228ENST00000524023 IFNAR2P48551 515 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 ITGA8P53708 1063 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 BPIFB4P59827 614 aa11.81□□□□□ -0.52
HDAC9-228ENST00000524023 CLDN10P78369 228 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms