RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 ZMAT2Q96NC0 199 aaKnown RBP13.63□□□□□ -0.23
CCNC-216ENST00000523961 CDCA3Q99618 268 aaPredicted RBP13.63□□□□□ -0.23
CCNC-216ENST00000523961 PAAF1Q9BRP4 392 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 HERC2P3Q9BVR0 1158 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 VN1R3Q9BXE9 311 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 TLE6Q9H808 572 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 PRDM6Q9NQX0 595 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 CACNG4Q9UBN1 327 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 HOOK1Q9UJC3 728 aaKnown RBP13.63□□□□□ -0.23
CCNC-216ENST00000523961 PCDHGC5Q9Y5F6 944 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 IRAK3Q9Y616 596 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 CITO14578 2027 aa13.63□□□□□ -0.23
CCNC-216ENST00000523961 LACTBL1A8MY62 500 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 F8W810 466 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 TMEM189-UBE2V1I3L0A0 370 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 EFEMP2O95967 443 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 RPL9P32969 192 aaKnown RBP13.62□□□□□ -0.23
CCNC-216ENST00000523961 CA8P35219 290 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 HOXD13P35453 343 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 NRIP1P48552 1158 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 SOX4Q06945 474 aaPredicted RBP13.62□□□□□ -0.23
CCNC-216ENST00000523961 ELAVL2Q12926 359 aaKnown RBP13.62□□□□□ -0.23
CCNC-216ENST00000523961 KCNB1Q14721 858 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 COL19A1Q14993 1142 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 DCLRE1AQ6PJP8 1040 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 HS2ST1Q7LGA3 356 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 RBM23Q86U06 439 aaKnown RBP13.62□□□□□ -0.23
CCNC-216ENST00000523961 NELFCDQ8IXH7 590 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 RNF168Q8IYW5 571 aaPredicted RBP13.62□□□□□ -0.23
CCNC-216ENST00000523961 PABPC5Q96DU9 382 aaKnown RBP13.62□□□□□ -0.23
CCNC-216ENST00000523961 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 CBWD1Q9BRT8 395 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 FAM213AQ9BRX8 229 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 IGFLR1Q9H665 355 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 ASB7Q9H672 318 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 CGNQ9P2M7 1197 aaKnown RBP13.62□□□□□ -0.23
CCNC-216ENST00000523961 UBQLN1Q9UMX0 589 aaKnown RBP13.62□□□□□ -0.23
CCNC-216ENST00000523961 SSX2IPQ9Y2D8 614 aa13.62□□□□□ -0.23
CCNC-216ENST00000523961 SF3B1O75533 1304 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■■■■ 52.3
CCNC-216ENST00000523961 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 HIDE1A8MVS5 230 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 EXTL3O43909 919 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 KINO60870 393 aaKnown RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 GADD45BO75293 160 aaPredicted RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 B3GAT3O94766 335 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 KIF20AO95235 890 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 KIF4AO95239 1232 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 IL18RAPO95256 599 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 URODP06132 367 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 CYP3A5P20815 502 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 CLCNKBP51801 687 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 UBE2HP62256 183 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 STK4Q13043 487 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 ZBTB6Q15916 424 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 DUSP6Q16828 381 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 UPP1Q16831 310 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 KNOP1Q1ED39 458 aaKnown RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 AAK1Q2M2I8 961 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 USP41Q3LFD5 358 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 KIAA1841Q6NSI8 718 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 CRELD2Q6UXH1 353 aaPredicted RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCNC-216ENST00000523961 ELOA2Q8IYF1 753 aaPredicted RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 GPR65Q8IYL9 337 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 EFHBQ8N7U6 833 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 KIAA0895Q8NCT3 520 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 HASPINQ8TF76 798 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 ATXN2LQ8WWM7 1075 aaKnown RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 C18orf25Q96B23 403 aaPredicted RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 SAAL1Q96ER3 474 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 GPR62Q9BZJ7 368 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 PCIF1Q9H4Z3 704 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 UBE2ZQ9H832 354 aaPredicted RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 GOLGA2P5Q9HBQ8 144 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
CCNC-216ENST00000523961 CLDND1Q9NY35 253 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 DERAQ9Y315 318 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 COL6A3P12111 3177 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 TRIP11Q15643 1979 aa13.61□□□□□ -0.23
CCNC-216ENST00000523961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.6□□□□□ -0.23
CCNC-216ENST00000523961 PODXLO00592 558 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 PER2O15055 1255 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 TGFB1I1O43294 461 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 TRAPPC3O43617 180 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 SMC2O95347 1197 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 GTF2F1P35269 517 aaKnown RBP eCLIP13.6□□□□□ -0.23
CCNC-216ENST00000523961 GLUD2P49448 558 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 DSG1Q02413 1049 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 SPAG1Q07617 926 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 ADAM15Q13444 863 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 PNOCQ13519 176 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 TMEM132DQ14C87 1099 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 CTC1Q2NKJ3 1217 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 JADE1Q6IE81 842 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 CLEC17AQ6ZS10 378 aa13.6□□□□□ -0.23
CCNC-216ENST00000523961 EP400NLQ6ZTU2 488 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms