RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 FIGNQ5HY92 759 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 RAPH1Q70E73 1250 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 ZC3H18Q86VM9 953 aaKnown RBP13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 GDAP1Q8TB36 358 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 AFG1LQ8WV93 481 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 CALR3Q96L12 384 aaKnown RBP13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 MCEEQ96PE7 176 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 TRIM51Q9BSJ1 452 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 PACSIN1Q9BY11 444 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 KLHL8Q9P2G9 620 aaPredicted RBP13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 YDJCA8MPS7 323 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 SRGAP2BP0DMP2 458 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 CYP2C8P10632 490 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 GLRA4Q5JXX5 417 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 GPAT2Q6NUI2 795 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 TNIP3Q96KP6 325 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 AFG3L2Q9Y4W6 797 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 CAPN7Q9Y6W3 813 aa13.87□□□□□ -0.19
PCDHGB1-201ENST00000523390 PDGFRAP16234 1089 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 NAMPTP43490 491 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 SEPT6Q14141 434 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 METTL7BQ6UX53 244 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 PLEKHH3Q7Z736 793 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 KLC2Q9H0B6 622 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 BAIAP2L1Q9UHR4 511 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 NPTXRO95502 500 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 ARL4CP56559 192 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 KCNA1Q09470 495 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 KIZQ2M2Z5 673 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 GSDMBQ8TAX9 411 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 TRPM4Q8TD43 1214 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 KATNAL1Q9BW62 490 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 MTMR12Q9C0I1 747 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 SIK2Q9H0K1 926 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 THAP2Q9H0W7 228 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 EFCC1Q9HA90 598 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 RRP15Q9Y3B9 282 aaKnown RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 COL14A1Q05707 1796 aaKnown RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 TYW5A2RUC4 315 aaKnown RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 HMGB1P1B2RPK0 211 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 CXCL11O14625 94 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 RPS6KA5O75582 802 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 MOCS2O96007 188 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 KRT14P02533 472 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 ITGB3P05106 788 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 ADCY2Q08462 1091 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 C6orf118Q5T5N4 469 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 C1orf228Q6PIY5 440 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 BZW1Q7L1Q6 419 aaKnown RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 NKX2-3Q8TAU0 364 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 NCAPGQ9BPX3 1015 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 PRKAG2Q9UGJ0 569 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 FBXL5Q9UKA1 691 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 FAM187AA6NFU0 413 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 SGPL1O95470 568 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 VTNP04004 478 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 TATDN1Q6P1N9 297 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 RYBPQ8N488 228 aaPredicted RBP13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 FAM118BQ9BPY3 351 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 KCNMB3Q9NPA1 279 aa13.86□□□□□ -0.19
PCDHGB1-201ENST00000523390 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 IRX4P78413 519 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 PCGF5Q86SE9 256 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 DNERQ8NFT8 737 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 ELMO3Q96BJ8 720 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 KLK14Q9P0G3 267 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 CLTAP09496 248 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 PMS2P54278 862 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 KRT17Q04695 432 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 ORC1Q13415 861 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 IL31RAQ8NI17 732 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 CDCA5Q96FF9 252 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 HPDLQ96IR7 371 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 POLIQ9UNA4 740 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 KCPQ6ZWJ8 1503 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 TOPAZ1Q8N9V7 1692 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 TOM1L1O75674 476 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 SUN1O94901 812 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 IL18RAPO95256 599 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 CYP3A4P08684 503 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 CYP2C19P33261 490 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 NXNQ6DKJ4 435 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 MOB2Q70IA6 237 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 SV2AQ7L0J3 742 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 CCDC197Q8NCU1 140 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 UBA3Q8TBC4 463 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 URGCPQ8TCY9 931 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 TRAPPC12Q8WVT3 735 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 DBR1Q9UK59 544 aaKnown RBP13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 PDHXO00330 501 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
PCDHGB1-201ENST00000523390 KCNJ1P48048 391 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms