RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 PI4K2BG5E9Z4 385 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 ENO1P06733 434 aaKnown RBP9.58□□□□□ -0.88
CSMD1-212ENST00000523387 RALAP11233 206 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 KDSRQ06136 332 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 PALB2Q86YC2 1186 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 XXYLT1Q8NBI6 393 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 SPOCK2Q92563 424 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 TSSK1BQ9BXA7 367 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 LRMDAQ9H2I8 198 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 IKZF4Q9H2S9 585 aa9.58□□□□□ -0.88
CSMD1-212ENST00000523387 SPECC1L-ADORA2AF8WAN1 911 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 KRT4P19013 534 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 TAC1P20366 129 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 ARSEP51690 589 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 SLC12A3P55017 1021 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 AP2B1P63010 937 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 COG7P83436 770 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 MIER3Q7Z3K6 550 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.57□□□□□ -0.88
CSMD1-212ENST00000523387 RIBC1Q8N443 379 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-212ENST00000523387 DTNBP1Q96EV8 351 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 C11orf70Q9BRQ4 267 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 TMEM117Q9H0C3 514 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 SMYD3Q9H7B4 428 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 TMEM206Q9H813 350 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 MYH7BA7E2Y1 1941 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 B2RBV5 119 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 KRT36O76013 467 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 TNNI1P19237 187 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 PTGIRP43119 386 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 KPNB1Q14974 876 aaKnown RBP9.57□□□□□ -0.88
CSMD1-212ENST00000523387 GRAMD1BQ3KR37 738 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 EPC2Q52LR7 807 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 RINT1Q6NUQ1 792 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 VSTM1Q6UX27 236 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 CLEC4GQ6UXB4 293 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 LRRC74BQ6ZQY2 392 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 PASD1Q8IV76 773 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 NME8Q8N427 588 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 TRIM11Q96F44 468 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 ADAM7Q9H2U9 754 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 NMRK1Q9NWW6 199 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 GTF3C4Q9UKN8 822 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 ZMYND8Q9ULU4 1186 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-212ENST00000523387 COG5Q9UP83 839 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 KIF1AQ12756 1690 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 LGR5O75473 907 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 TPBGLP0DKB5 382 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 KITP10721 976 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 SP100P23497 879 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-212ENST00000523387 RPS6KA3P51812 740 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 PPATQ06203 517 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 PKN2Q16513 984 aaKnown RBP9.57□□□□□ -0.88
CSMD1-212ENST00000523387 ARSHQ5FYA8 562 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 FAM102BQ5T8I3 360 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 ANO7Q6IWH7 933 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 RASSF3Q86WH2 238 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 RAB3IL1Q8TBN0 382 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 OLFM3Q96PB7 478 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 ZNF577Q9BSK1 485 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 IMPG2Q9BZV3 1241 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 PSMC3IPQ9P2W1 217 aaPredicted RBP9.57□□□□□ -0.88
CSMD1-212ENST00000523387 SEL1LQ9UBV2 794 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 SRP68Q9UHB9 627 aaKnown RBP9.57□□□□□ -0.88
CSMD1-212ENST00000523387 STARD13Q9Y3M8 1113 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 ASTN1O14525 1302 aa9.57□□□□□ -0.88
CSMD1-212ENST00000523387 H3BRJ5 948 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 LINGO3P0C6S8 592 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 TMPRSS15P98073 1019 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 SLC34A1Q06495 639 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 SDCCAG8Q86SQ7 713 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 THTPAQ9BU02 230 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 OSBPL8Q9BZF1 889 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 ZC3H12CQ9C0D7 883 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 DENND2DQ9H6A0 471 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 NDC80O14777 642 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 EIF3DO15371 548 aaKnown RBP eCLIP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 LPXNO60711 386 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 ZBED4O75132 1171 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 BMP3P12645 472 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 EPHB1P54762 984 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 BASP1P80723 227 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 C2CD6Q53TS8 623 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 RGS9BPQ6ZS82 235 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 BRINP3Q76B58 766 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 RHOT1Q8IXI2 618 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 SEC14L1Q92503 715 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 TEKT3Q9BXF9 490 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 ACP6Q9NPH0 428 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 MYO5AQ9Y4I1 1855 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 PEX11AO75192 247 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 HARSP12081 509 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 TMED1Q13445 227 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 CERKLQ49MI3 558 aaPredicted RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 UBAP2Q5T6F2 1119 aaKnown RBP9.56□□□□□ -0.88
CSMD1-212ENST00000523387 LGSNQ5TDP6 509 aa9.56□□□□□ -0.88
CSMD1-212ENST00000523387 INTS5Q6P9B9 1019 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms