RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	ELAVL2	Q12926	359 aa	Known RBP	13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	STRN3	Q13033	797 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	DHX8	Q14562	1220 aa	Known RBP	13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	PSMD5	Q16401	504 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	SLC10A6	Q3KNW5	377 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	SEZ6	Q53EL9	994 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	SPECC1	Q5M775	1068 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	CYP26C1	Q6V0L0	522 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	ZPBP2	Q6X784	338 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	CCDC149	Q6ZUS6	474 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	HAUS6	Q7Z4H7	955 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	CEP57	Q86XR8	500 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	PLCD3	Q8N3E9	789 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	RAD54L	Q92698	747 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	PBXIP1	Q96AQ6	731 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	UROC1	Q96N76	676 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	ACAP3	Q96P50	834 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	SMOC2	Q9H3U7	446 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	CNTN3	Q9P232	1028 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	LARS	Q9P2J5	1176 aa	Known RBP	13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	DPP7	Q9UHL4	492 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	FBXO2	Q9UK22	296 aa	Predicted RBP	13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	SORCS3	Q9UPU3	1222 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	MTMR6	Q9Y217	621 aa		13.55	□□□□□ -0.24
VEGFA-223	ENST00000523125	ZDBF2	Q9HCK1	2354 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125		I3L4J1	428 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	MARCKS	P29966	332 aa	Predicted RBP	13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	MCL1	Q07820	350 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	C18orf25	Q96B23	403 aa	Predicted RBP	13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	FAM122A	Q96E09	287 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	MFSD14A	Q96MC6	490 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	FIZ1	Q96SL8	496 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	WDR6	Q9NNW5	1121 aa	Known RBP	13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	FOXD4L1	Q9NU39	408 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	ZDHHC7	Q9NXF8	308 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125	ANKFY1	Q9P2R3	1169 aa		13.54	□□□□□ -0.24
VEGFA-223	ENST00000523125		K7ELQ4	463 aa	Predicted RBP	13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	CLDN3	O15551	220 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	FAM189A1	O60320	539 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	ZMYND10	O75800	440 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	HARS	P12081	509 aa	Known RBP	13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	TKT	P29401	623 aa	Known RBP	13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	DDIT3	P35638	169 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	BRCC3	P46736	316 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	ELMSAN1	Q6PJG2	1045 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	OTOP3	Q7RTS5	596 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	UBALD2	Q8IYN6	164 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	TMEM130	Q8N3G9	435 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	MYCT1	Q8N699	235 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	SMG7	Q92540	1137 aa	Known RBP	13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	LARP4B	Q92615	738 aa	Known RBP	13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	DDX27	Q96GQ7	796 aa	Known RBP	13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	CLIC6	Q96NY7	704 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	PRKD2	Q9BZL6	878 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	SLC38A7	Q9NVC3	462 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	MTRR	Q9UBK8	725 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	FBXW11	Q9UKB1	542 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	TBX20	Q9UMR3	447 aa		13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	SRPRB	Q9Y5M8	271 aa	Known RBP	13.53	□□□□□ -0.24
VEGFA-223	ENST00000523125	TTC26	A0AVF1	554 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125		H0YCG3	227 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	TRAK2	O60296	914 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	FAM13A	O94988	1023 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	PDGFB	P01127	241 aa	Predicted RBP	13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	PIGR	P01833	764 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	OR1D2	P34982	312 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	CEBPZ	Q03701	1054 aa	Known RBP	13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	MTMR3	Q13615	1198 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	RAB33A	Q14088	237 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	ZBTB6	Q15916	424 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	SLC39A4	Q6P5W5	647 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	PDXDC1	Q6P996	788 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	FBXL6	Q8N531	539 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	ACSF2	Q96CM8	615 aa	Predicted RBP	13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	USP28	Q96RU2	1077 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	PARVG	Q9HBI0	331 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	CLUH	O75153	1309 aa		13.52	□□□□□ -0.25
VEGFA-223	ENST00000523125	SCN1A	P35498	2009 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	PODXL	O00592	558 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	TRAPPC3	O43617	180 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	STX6	O43752	255 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	TBC1D4	O60343	1298 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	CLTA	P09496	248 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	CXCL8	P10145	99 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	SCP2	P22307	547 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	NMT1	P30419	496 aa	Known RBP	13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	RPL9	P32969	192 aa	Known RBP	13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	TNFSF9	P41273	254 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	GTF2B	Q00403	316 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	SLC39A14	Q15043	492 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	ZBTB41	Q5SVQ8	909 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	IER5L	Q5T953	404 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	RASSF8	Q8NHQ8	419 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	SNX21	Q969T3	373 aa		13.51	□□□□□ -0.25
VEGFA-223	ENST00000523125	MYADM	Q96S97	322 aa		13.51	□□□□□ -0.25

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