RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 UBAP2Q5T6F2 1119 aaKnown RBP11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ANKRD35Q8N283 1001 aa11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 FNBP1Q96RU3 617 aa11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CEP89Q96ST8 783 aa11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 TARS2Q9BW92 718 aaKnown RBP11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 APOBEC3GQ9HC16 384 aaKnown RBP11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ANAPC7Q9UJX3 599 aa11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 STYXL1Q9Y6J8 313 aa11.52□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MROH7Q68CQ1 1323 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ZC3H11AO75152 810 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SHBGP04278 402 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SSTR3P32745 418 aaPredicted RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MDH1P40925 334 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 PIK3CAP42336 1068 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 RWDD2BP57060 319 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 STRN3Q13033 797 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MKRN4PQ13434 485 aaPredicted RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 BIRC3Q13489 604 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SEZ6Q53EL9 994 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ENOSF1Q7L5Y1 443 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MCOLN2Q8IZK6 566 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 PCYT2Q99447 389 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ANKFY1Q9P2R3 1169 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 RASAL2Q9UJF2 1139 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 PTPN22Q9Y2R2 807 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 H0YCG3 227 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CLDN3O15551 220 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 GGPS1O95749 300 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 UBA1P22314 1058 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 RRM1P23921 792 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ICAM3P32942 547 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ARL2P36404 184 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 COILP38432 576 aaPredicted RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ENPEPQ07075 957 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CYP1B1Q16678 543 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 KRT71Q3SY84 523 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 NOL9Q5SY16 702 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 DAB2IPQ5VWQ8 1189 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 BTBD7Q9P203 1132 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 FBXO40Q9UH90 709 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 NOVA2Q9UNW9 492 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 UMODL1Q5DID0 1318 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 K7ERI5 159 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 NDUFAB1O14561 156 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ACO1P21399 889 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SCP2P22307 547 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MAPK4P31152 587 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 ALDH5A1P51649 535 aaPredicted RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SEC24CP53992 1094 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 DRG2P55039 364 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 PTGISQ16647 500 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 RUFY4Q6ZNE9 571 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 DEPTORQ8TB45 409 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CYFIP2Q96F07 1278 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 KIAA1586Q9HCI6 787 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 RBAKQ9NYW8 714 aaPredicted RBP11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 GPRC5DQ9NZD1 345 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SIP14410 1827 aa11.51□□□□□ -0.57
RAB11FIP1-204ENST00000522774 GSTTP1A0A1W2PQM5 241 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 TTLL13PA6NNM8 815 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 A6NNZ2 444 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 USP2O75604 605 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 NAMPTP43490 491 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 DRP2Q13474 957 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 TUBB8Q3ZCM7 444 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 WDR44Q5JSH3 913 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 PASD1Q8IV76 773 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CCDC105Q8IYK2 499 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 DNERQ8NFT8 737 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 OR5B17Q8NGF7 314 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 HERPUD2Q9BSE4 406 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 EPN3Q9H201 632 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SLC12A6Q9UHW9 1150 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 PCDHB2Q9Y5E7 798 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SNCAIPQ9Y6H5 919 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 IGKV6D-21A0A0A0MT36 114 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 EBAG9O00559 213 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 PIGRP01833 764 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 HARSP12081 509 aaKnown RBP11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 TMOD1P28289 359 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 PMS2P54278 862 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CORO7P57737 925 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 VGLL4Q14135 290 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SH3D19Q5HYK7 790 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 AGBL2Q5U5Z8 902 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CHST13Q8NET6 341 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 C1orf54Q8WWF1 131 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 SLC7A3Q8WY07 619 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MSTO1Q9BUK6 570 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MTUS1Q9ULD2 1270 aa11.5□□□□□ -0.57
RAB11FIP1-204ENST00000522774 O00370 1275 aa11.49□□□□□ -0.57
RAB11FIP1-204ENST00000522774 FARP2O94887 1054 aaPredicted RBP11.49□□□□□ -0.57
RAB11FIP1-204ENST00000522774 CYP1A1P04798 512 aaPredicted RBP11.49□□□□□ -0.57
RAB11FIP1-204ENST00000522774 MAGOHP61326 146 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP1-204ENST00000522774 IFFO1Q0D2I5 559 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms