RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 MAP3K7CLP57077 242 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 KCNB1Q14721 858 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 DUOXA2Q1HG44 320 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 SPDYE7PQ495Y7 208 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 COBLL1Q53SF7 1204 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 AARS2Q5JTZ9 985 aaKnown RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 SRLQ86TD4 932 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 SLC30A5Q8TAD4 765 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 GFM2Q969S9 779 aaKnown RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 USP15Q9Y4E8 981 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 FARP1Q9Y4F1 1045 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 SHROOM2Q13796 1616 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 KIF1CO43896 1103 aaKnown RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 ZNF189O75820 626 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 SERPINI2O75830 405 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 NMT1P30419 496 aaKnown RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 ACTR2P61160 394 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 ANKS3Q6ZW76 656 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 AGGF1Q8N302 714 aaeCLIP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 RANBP17Q9H2T7 1088 aaKnown RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 PRDM5Q9NQX1 630 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 PSMC3IPQ9P2W1 217 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 FOXP2O15409 715 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 ADCY3O60266 1144 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 ARIH2O95376 493 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 KCNA3P22001 575 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 STX3Q13277 289 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 LRRC8BQ6P9F7 803 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 MRPL1Q9BYD6 325 aaKnown RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 FBXO2Q9UK22 296 aaPredicted RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 MYO1GB0I1T2 1018 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 RALAP11233 206 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 YWHABP31946 246 aaKnown RBP11.99□□□□□ -0.49
LAMA4-219ENST00000522006 CDK17Q00537 523 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 SEMA3FQ13275 785 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 SPDYAQ5MJ70 313 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 CLEC4FQ8N1N0 589 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 TEX9Q8N6V9 391 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 KCNF1Q9H3M0 494 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 PCMTD2Q9NV79 361 aa11.99□□□□□ -0.49
LAMA4-219ENST00000522006 USP11P51784 963 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 ATXN3P54252 364 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-219ENST00000522006 TRIM60Q495X7 471 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 HAUS6Q7Z4H7 955 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 MFN1Q8IWA4 741 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 C4orf33Q8N1A6 199 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 HPS3Q969F9 1004 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 AGAP3Q96P47 875 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 TRIM62Q9BVG3 475 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 MARCOQ9UEW3 520 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-219ENST00000522006 LAMC1P11047 1609 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 EYA4O95677 639 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 DDX5P17844 614 aaKnown RBP11.98□□□□□ -0.49
LAMA4-219ENST00000522006 TTLL6Q8N841 843 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 TUFT1Q9NNX1 390 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 ZNF197O14709 1029 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 CPB1P15086 417 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 KYAT1Q16773 422 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 SEC16BQ96JE7 1060 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 ZNF560Q96MR9 790 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 RBM15Q96T37 977 aaKnown RBP eCLIP11.98□□□□□ -0.49
LAMA4-219ENST00000522006 ALDH8A1Q9H2A2 487 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-219ENST00000522006 VIPAS39Q9H9C1 493 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 CDYLQ9Y232 598 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 NCAPD2Q15021 1401 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 PDXKO00764 312 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 KIZQ2M2Z5 673 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 SCFD1Q8WVM8 642 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 CHP1Q99653 195 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 HSPBP1Q9NZL4 362 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 APEX2Q9UBZ4 518 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 UGGT1Q9NYU2 1555 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 GRIK1P39086 918 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 SLC18A3Q16572 532 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 TMED8Q6PL24 325 aaPredicted RBP11.98□□□□□ -0.49
LAMA4-219ENST00000522006 TMEM161AQ9NX61 479 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 NEU2Q9Y3R4 380 aa11.98□□□□□ -0.49
LAMA4-219ENST00000522006 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 C16orf96A6NNT2 1141 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 C5orf58C9J3I9 102 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 SNAP23O00161 211 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 ITIH2P19823 946 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 HSD17B4P51659 736 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 DEPDC1Q5TB30 811 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 PKN3Q6P5Z2 889 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 DCUN1D1Q96GG9 259 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 CD209Q9NNX6 404 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 TJP2Q9UDY2 1190 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 ZC3H7BQ9UGR2 993 aaKnown RBP11.97□□□□□ -0.49
LAMA4-219ENST00000522006 APRTP07741 180 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 S100A5P33763 92 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 SYTL3Q4VX76 610 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 DAB2IPQ5VWQ8 1189 aa11.97□□□□□ -0.49
LAMA4-219ENST00000522006 OR2W6PQ8NHA6 318 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms